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6030458C11Rik Gene Detail
Summary
  • Symbol
    6030458C11Rik
  • Name
    RIKEN cDNA 6030458C11 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925127
    NCBI Gene: 77877
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:12808263-12824735 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 5.98 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925127
 protein coding gene Chr15:12806012-12824767 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021739
 protein coding gene Chr15:10056839-10073366 (-)
A/J MGP_AJ_G0021699
 protein coding gene Chr15:9741160-9757729 (-)
AKR/J MGP_AKRJ_G0021677
 protein coding gene Chr15:10023243-10039736 (-)
BALB/cJ MGP_BALBcJ_G0021706
 protein coding gene Chr15:9649887-9667249 (-)
C3H/HeJ MGP_C3HHeJ_G0021482
 protein coding gene Chr15:9959914-9977347 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022145
 protein coding gene Chr15:10417977-10434475 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019686
 protein coding gene Chr15:9268877-9284488 (-)
CAST/EiJ MGP_CASTEiJ_G0020998
 protein coding gene Chr15:10079356-10096921 (-)
CBA/J MGP_CBAJ_G0021451
 protein coding gene Chr15:10736022-10755644 (-)
DBA/2J MGP_DBA2J_G0021575
 protein coding gene Chr15:9596921-9617369 (-)
FVB/NJ MGP_FVBNJ_G0021553
 protein coding gene Chr15:9452296-9469201 (-)
LP/J MGP_LPJ_G0021643
 protein coding gene Chr15:9994690-10011144 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021578
 protein coding gene Chr15:10942636-10960037 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022168
 protein coding gene Chr15:10010201-10034514 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0020579
 protein coding gene Chr15:9947836-9967282 (-)
WSB/EiJ MGP_WSBEiJ_G0021054
 protein coding gene Chr15:10003474-10019985 (-)



Homology
more
  • Human Ortholog
    C5orf22, chromosome 5 open reading frame 22
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C5orf22, chromosome 5 open reading frame 22
  • Links
    NCBI Gene ID: 55322
    neXtProt AC: NX_Q49AR2
    UniProt: Q49AR2

  • Chr Location
    5p13.3; chr5:31532287-31555053 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    61
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022195 Ensembl Gene Model | MGI Sequence Detail 16473 C57BL/6J ±  kb
transcript ENSMUST00000057256 Ensembl | MGI Sequence Detail 3966 Not Applicable  
polypeptide ENSMUSP00000055656 Ensembl | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory