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6030458C11Rik Gene Detail
Summary
  • Symbol
    6030458C11Rik
  • Name
    RIKEN cDNA 6030458C11 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925127
    NCBI Gene: 77877
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:12808177-12824649 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 5.98 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    255 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925127
protein coding gene Chr15:12808177-12824688 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021739
protein coding gene Chr15:10056839-10073366 (-)
A/J MGP_AJ_G0021699
protein coding gene Chr15:9741160-9757729 (-)
AKR/J MGP_AKRJ_G0021677
protein coding gene Chr15:10023243-10039736 (-)
BALB/cJ MGP_BALBcJ_G0021706
protein coding gene Chr15:9649887-9667249 (-)
C3H/HeJ MGP_C3HHeJ_G0021482
protein coding gene Chr15:9959914-9977347 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022145
protein coding gene Chr15:10417977-10434475 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019686
protein coding gene Chr15:9268877-9284488 (-)
CAST/EiJ MGP_CASTEiJ_G0020998
protein coding gene Chr15:10079356-10096921 (-)
CBA/J MGP_CBAJ_G0021451
protein coding gene Chr15:10736022-10755644 (-)
DBA/2J MGP_DBA2J_G0021575
protein coding gene Chr15:9596921-9617369 (-)
FVB/NJ MGP_FVBNJ_G0021553
protein coding gene Chr15:9452296-9469201 (-)
LP/J MGP_LPJ_G0021643
protein coding gene Chr15:9994690-10011144 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021578
protein coding gene Chr15:10942636-10960037 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022168
protein coding gene Chr15:10010201-10034514 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0020579
protein coding gene Chr15:9947836-9967282 (-)
WSB/EiJ MGP_WSBEiJ_G0021054
protein coding gene Chr15:10003474-10019985 (-)



Homology
more
  • Human Ortholog
    C5orf22, chromosome 5 open reading frame 22
  • Vertebrate Orthologs
    9
  • Human Ortholog
    C5orf22, chromosome 5 open reading frame 22
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 55322
    neXtProt AC: NX_Q49AR2
    UniProt: Q49AR2

  • Chr Location
    5p13.3; chr5:31532086-31555058 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022195 Ensembl Gene Model | MGI Sequence Detail 16473 C57BL/6J ±  kb
transcript ENSMUST00000057256 Ensembl | MGI Sequence Detail 3966 Not Applicable  
polypeptide ENSMUSP00000055656 Ensembl | MGI Sequence Detail 442 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR024131 Uncharacterised protein family UPF0489
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory