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Msl2 Gene Detail
Summary
  • Symbol
    Msl2
  • Name
    MSL complex subunit 2
  • Synonyms
    E130103E02Rik, Msl2l1, Rnf184
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925103
    NCBI Gene: 77853
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:101074101-101104800 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 53.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    173 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925103
protein coding gene Chr9:101074020-101104800 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035181
protein coding gene Chr9:102559094-102585991 (+)
A/J MGP_AJ_G0035162
protein coding gene Chr9:98923105-98952465 (+)
AKR/J MGP_AKRJ_G0035094
protein coding gene Chr9:101334683-101358911 (+)
BALB/cJ MGP_BALBcJ_G0035155
protein coding gene Chr9:98607469-98637883 (+)
C3H/HeJ MGP_C3HHeJ_G0034865
protein coding gene Chr9:101766925-101792541 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035675
protein coding gene Chr9:105486650-105517489 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032574
protein coding gene Chr9:96561305-96586338 (+)
CAST/EiJ MGP_CASTEiJ_G0034176
protein coding gene Chr9:101571437-101598500 (+)
CBA/J MGP_CBAJ_G0034833
protein coding gene Chr9:109157917-109186522 (+)
DBA/2J MGP_DBA2J_G0034995
protein coding gene Chr9:98411359-98436051 (+)
FVB/NJ MGP_FVBNJ_G0034943
protein coding gene Chr9:97211649-97240116 (+)
LP/J MGP_LPJ_G0035071
protein coding gene Chr9:102776816-102803483 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034982
protein coding gene Chr9:111039573-111066310 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035697
protein coding gene Chr9:101601760-101631917 (+)
PWK/PhJ MGP_PWKPhJ_G0033883
protein coding gene Chr9:98647410-98671185 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033719
protein coding gene Chr9:101649836-101675301 (+)
WSB/EiJ MGP_WSBEiJ_G0034296
protein coding gene Chr9:101477599-101507952 (+)



Homology
more
  • Human Ortholog
    MSL2, MSL complex subunit 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    MSL2, MSL complex subunit 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MSL-2, MSL2L1, RNF184
  • Links
    NCBI Gene ID: 55167
    neXtProt AC: NX_Q9HCI7
    UniProt: Q9HCI7

  • Chr Location
    3q22.3; chr3:136148918-136197300 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 10021
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: MSL2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066415 Ensembl Gene Model | MGI Sequence Detail 30700 C57BL/6J ±  kb
transcript ENSMUST00000085177 Ensembl | MGI Sequence Detail 4889 Not Applicable  
polypeptide ENSMUSP00000082270 Ensembl | MGI Sequence Detail 577 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 11
    Primer pair 1

    Microarray probesets 8
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:246912 Ye A, et al., PEG3 control on the mammalian MSL complex. PLoS One. 2017;12(6):e0178363

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/22/2019
MGI 6.14
The Jackson Laboratory