About   Help   FAQ
Fam178a Gene Detail
Summary
  • Symbol
    Fam178a
  • Name
    family with sequence similarity 178, member A
  • Synonyms
    6030443O07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924968
    NCBI Gene: 226151
Location & Maps
more
  • Sequence Map
    Chr19:44931119-44983787 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      52669 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 38.16 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLF2, SMC5-SMC6 complex localization factor 2
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SLF2, SMC5-SMC6 complex localization factor 2
    Orthology source: HomoloGene
  • Synonyms
    C10orf6, FAM178A
  • Links
    NCBI Gene ID: 55719
    neXtProt AC: NX_Q8IX21

  • Chr Location
    10q24.31; chr10:100912569-100965134 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036097 Ensembl Gene Model | MGI Sequence Detail 52669 C57BL/6J ±  kb
transcript ENSMUST00000096053 Ensembl | MGI Sequence Detail 6880 Not Applicable  
polypeptide ENSMUSP00000093758 Ensembl | MGI Sequence Detail 1163 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    331 from dbSNP Build 142
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR026161 FAM178 family
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 8
Other
Accession IDs
less
MGI:2147633
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/12/2016
MGI 6.04
The Jackson Laboratory