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C330007P06Rik Gene Detail
Summary
  • Symbol
    C330007P06Rik
  • Name
    RIKEN cDNA C330007P06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924894
    NCBI Gene: 77644
Location & Maps
more
  • Sequence Map
    ChrX:36823737-36874111 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      50375 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 21.23 cM, cytoband A2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CXorf56, chromosome X open reading frame 56
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CXorf56, chromosome X open reading frame 56
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 63932
    neXtProt AC: NX_Q9H5V9

  • Chr Location
    Xq24; chrX:119538149-119565434 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 1 genetic background
    17 images
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    24
  • Gene trapped
    22
  • Targeted
    2
Male chimeras hemizygous for a gene trapped allele exhibit abnormal midbrain-hindbrain boundary morphology and decreased forebrain size. A subset of male chimeras hemizygous for a different gene trapped allele exhibit embryonic growth retardation.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017108 VEGA Gene Model | MGI Sequence Detail 50375 C57BL/6J ±  kb
transcript OTTMUST00000041430 VEGA | MGI Sequence Detail 1145 Not Applicable  
polypeptide OTTMUSP00000018720 VEGA | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    95 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029704 UPF0428 family
Molecular
Reagents
less
  • All nucleic 73
    cDNA 73

    Microarray probesets 5
References
more
  • Summaries
    All 27
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory