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C330007P06Rik Gene Detail
Summary
  • Symbol
    C330007P06Rik
  • Name
    RIKEN cDNA C330007P06 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924894
    NCBI Gene: 77644
  • Alliance
Location & Maps
more
  • Sequence Map
    ChrX:36823737-36874111 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      50375 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 21.23 cM, cytoband A2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CXorf56, chromosome X open reading frame 56
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CXorf56, chromosome X open reading frame 56
    Orthology source: HGNC, HomoloGene
  • Synonyms
    MRX107
  • Links
    NCBI Gene ID: 63932
    neXtProt AC: NX_Q9H5V9
    UniProt: Q9H5V9

  • Chr Location
    Xq24; chrX:119538149-119565434 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 2 alleles in 1 genetic background
    17 images
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Male chimeras hemizygous for a gene trapped allele exhibit abnormal midbrain-hindbrain boundary morphology and decreased forebrain size. A subset of male chimeras hemizygous for a different gene trapped allele exhibit embryonic growth retardation.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017108 VEGA Gene Model | MGI Sequence Detail 50375 C57BL/6J ±  kb
transcript OTTMUST00000041430 VEGA | MGI Sequence Detail 1145 Not Applicable  
polypeptide OTTMUSP00000018720 VEGA | MGI Sequence Detail 227 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    95 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029704 UPF0428 family
Molecular
Reagents
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  • All nucleic 74
    cDNA 74

    Microarray probesets 5
References
more
  • Summaries
    All 31
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:261840 Verkerk AJMH, et al., CXorf56, a dendritic neuronal protein, identified as a new candidate gene for X-linked intellectual disability. Eur J Hum Genet. 2018 Apr;26(4):552-560

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/11/2018
MGI 6.12
The Jackson Laboratory