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Ric1 Gene Detail
Summary
  • Symbol
    Ric1
  • Name
    RAB6A GEF complex partner 1
  • Synonyms
    C030046E11Rik, C130057E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924893
    NCBI Gene: 226089
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:29522282-29605921 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 24.07 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    464 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924893
protein coding gene Chr19:29522282-29606829 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025024
protein coding gene Chr19:27987891-28072900 (+)
A/J MGP_AJ_G0025001
protein coding gene Chr19:26574939-26661455 (+)
AKR/J MGP_AKRJ_G0024969
protein coding gene Chr19:27544319-27630198 (+)
BALB/cJ MGP_BALBcJ_G0025000
protein coding gene Chr19:26624783-26715414 (+)
C3H/HeJ MGP_C3HHeJ_G0024756
protein coding gene Chr19:27511817-27599467 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025441
protein coding gene Chr19:28761740-28850871 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022860
protein coding gene Chr19:26546454-26632707 (+)
CAST/EiJ MGP_CASTEiJ_G0024226
protein coding gene Chr19:27355612-27456592 (+)
CBA/J MGP_CBAJ_G0024734
protein coding gene Chr19:30106428-30203195 (+)
DBA/2J MGP_DBA2J_G0024866
protein coding gene Chr19:26532367-26616238 (+)
FVB/NJ MGP_FVBNJ_G0024828
protein coding gene Chr19:26390116-26471913 (+)
LP/J MGP_LPJ_G0024951
protein coding gene Chr19:27984656-28071735 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024855
protein coding gene Chr19:30049918-30140709 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025496
protein coding gene Chr19:27552818-27645287 (+)
PWK/PhJ MGP_PWKPhJ_G0023974
protein coding gene Chr19:26208794-26307473 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023778
protein coding gene Chr19:26836618-26922561 (+)
WSB/EiJ MGP_WSBEiJ_G0024293
protein coding gene Chr19:27610983-27697124 (+)



Homology
more
  • Human Ortholog
    RIC1, RIC1 homolog, RAB6A GEF complex partner 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RIC1, RIC1 homolog, RAB6A GEF complex partner 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA207C16.1, CIP150, KIAA1432
  • Links
    NCBI Gene ID: 57589
    neXtProt AC: NX_Q4ADV7
    UniProt: Q4ADV7

  • Chr Location
    9p24.1; chr9:5629030-5778633 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 13806
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RIC1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    13 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 226089 NCBI Gene Model | MGI Sequence Detail 83640 C57BL/6J ±  kb
transcript NM_001081319 RefSeq | MGI Sequence Detail 6282 Not Specified  
polypeptide Q69ZJ7 UniProt | EBI | MGI Sequence Detail 1422 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    6 Sequences
  • InterPro Domains
    IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
    IPR040096 RAB6A-GEF complex partner protein 1
    IPR009771 Ribosome control protein 1
    IPR036322 WD40-repeat-containing domain superfamily
    IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Molecular
Reagents
less
  • All nucleic 35
    cDNA 35

    Microarray probesets 3
Other
Accession IDs
less
MGI:3041191
References
more
  • Summaries
    All 28
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory