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C330002G04Rik Gene Detail
Summary
  • Symbol
    C330002G04Rik
  • Name
    RIKEN cDNA C330002G04 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924860
    NCBI Gene: 77610
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:22956111-23053270 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 17.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1217 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924860
 lncRNA gene Chr19:22955594-23053309 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005818
 lincRNA gene Chr19:21143684-21190707 (-)
A/J MGP_AJ_G0005809
 lincRNA gene Chr19:19999473-20038894 (-)
AKR/J MGP_AKRJ_G0005785
 lincRNA gene Chr19:20763233-20806352 (-)
BALB/cJ MGP_BALBcJ_G0005788
 lincRNA gene Chr19:20037924-20081886 (-)
C3H/HeJ MGP_C3HHeJ_G0005736
 lincRNA gene Chr19:20721437-20761907 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005948
 lincRNA gene Chr19:21836925-21879921 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005289
 lincRNA gene Chr19:20184010-20223369 (-)
CAST/EiJ MGP_CASTEiJ_G0005674
 lincRNA gene Chr19:20423847-20469134 (-)
CBA/J MGP_CBAJ_G0005721
 lincRNA gene Chr19:22755354-22800266 (-)
DBA/2J MGP_DBA2J_G0005741
 lincRNA gene Chr19:20013502-20052895 (-)
FVB/NJ MGP_FVBNJ_G0005768
 lincRNA gene Chr19:19868519-19906688 (-)
LP/J MGP_LPJ_G0005822
 lincRNA gene Chr19:21085446-21131038 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005754
 lincRNA gene Chr19:22851422-22897677 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005946
 lincRNA gene Chr19:20736103-20782819 (-)
PWK/PhJ MGP_PWKPhJ_G0005621
 lincRNA gene Chr19:19581961-19623126 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0005728
 lincRNA gene Chr19:20769746-20813182 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    3
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    35
  • RefSeq
    11
Representative SequencesLengthStrain/SpeciesFlank
genomic 77610 NCBI Gene Model | MGI Sequence Detail 97160 C57BL/6J ±  kb
transcript BC044868 GenBank | ENA | DDBJ | MGI Sequence Detail 2065 FVB/N  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 2
    Primer pair 1
    Other 1
References
more
  • Summaries
    All 8
    Developmental Gene Expression 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:123644 Roma G, et al., A novel view of the transcriptome revealed from gene trapping in mouse embryonic stem cells. Genome Res. 2007 Jul;17(7):1051-60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory