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Nup210l Gene Detail
Summary
  • Symbol
    Nup210l
  • Name
    nucleoporin 210-like
  • Synonyms
    4930548O11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924845
    NCBI Gene: 77595
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:90104132-90212048 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.20 cM, cytoband F2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    572 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924845
protein coding gene Chr3:90101569-90212151 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027454
protein coding gene Chr3:90371384-90499460 (+)
A/J MGP_AJ_G0027418
protein coding gene Chr3:87376021-87488478 (+)
AKR/J MGP_AKRJ_G0027382
protein coding gene Chr3:89519303-89641674 (+)
BALB/cJ MGP_BALBcJ_G0027427
protein coding gene Chr3:87344002-87453329 (+)
C3H/HeJ MGP_C3HHeJ_G0027169
protein coding gene Chr3:89692842-89808349 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027873
protein coding gene Chr3:93770551-93893611 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025225
protein coding gene Chr3:82871444-82991835 (+)
CAST/EiJ MGP_CASTEiJ_G0026615
protein coding gene Chr3:90061265-90184877 (+)
CBA/J MGP_CBAJ_G0027143
protein coding gene Chr3:97007422-97138703 (+)
DBA/2J MGP_DBA2J_G0027281
protein coding gene Chr3:86748930-86864441 (+)
FVB/NJ MGP_FVBNJ_G0027249
protein coding gene Chr3:85084009-85197489 (+)
LP/J MGP_LPJ_G0027390
protein coding gene Chr3:91454349-91572639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027269
protein coding gene Chr3:103193988-103335513 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027932
protein coding gene Chr3:89265370-89392540 (+)
PWK/PhJ MGP_PWKPhJ_G0026349
protein coding gene Chr3:86638723-86750037 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026168
protein coding gene Chr3:88438652-88569678 (+)
WSB/EiJ MGP_WSBEiJ_G0026697
protein coding gene Chr3:89657971-89783894 (+)



Homology
more
  • Human Ortholog
    NUP210L, nucleoporin 210 like
  • Vertebrate Orthologs
    8
  • Human Ortholog
    NUP210L, nucleoporin 210 like
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 91181
    neXtProt AC: NX_Q5VU65
    UniProt: Q5VU65

  • Chr Location
    1q21.3; chr1:153992582-154155116 (-)  GRCh38.p7

Human Diseases
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  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a transgene insertion exhibit male infertility, asthenozoospermia, teratozoospermia, azoospermia, and seminiferous tubule degeneration.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027939 Ensembl Gene Model | MGI Sequence Detail 107917 C57BL/6J ±  kb
transcript ENSMUST00000200410 Ensembl | MGI Sequence Detail 5710 Not Applicable  
polypeptide ENSMUSP00000143368 Ensembl | MGI Sequence Detail 1881 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 10
Other
Accession IDs
less
MGI:3050221
References
more
  • Summaries
    All 29
    Diseases 1
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:90913 Kisseberth WC, et al., Ubiquitous expression of marker transgenes in mice and rats. Dev Biol. 1999 Oct 1;214(1):128-38
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory