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Ddx10
Gene Detail
 Symbol
Name
ID
Ddx10
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
MGI:1924841
Synonyms 4632415A01Rik
Feature Type protein coding gene
Genetic Map
Chromosome 9
29.12 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:53098454-53248112 bp, - strand
From NCBI annotation of GRCm38

  149659 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20922  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Ddx10

Human
homologs
Human Homolog DDX10, DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
NCBI Gene ID 1662
neXtProt AC  NX_Q13206
Human Synonyms  HRH-J8
Human Chr (Location)  11q22-q23; chr11:108665025-108940930 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(18) : Gene trapped(18)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ddx10 interacts with 151 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process biological_process
Component cellular_component
Function ATP binding, helicase activity, ...
External Resources: FuncBase
Expression
cDNA source data(64)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(64) cDNA(64)
Microarray probesets(6)
Other database
links
Ensembl Gene ModelENSMUSG00000053289 (Evidence)
Entrez Gene77591 (Evidence)
UniGene133560
DFCITC1576468
DoTSDT.103559697, DT.488685
NIA Mouse Gene IndexU030868
EC3.6.4.13
Consensus CDS ProjectCCDS52796.1
International Mouse Knockout Project StatusDdx10
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 77591 NCBI Gene Model | MGI Sequence Detail 149659 C57BL/6J ±  kb
transcript NM_029936 RefSeq | MGI Sequence Detail 3368 Not Specified 
polypeptide Q80Y44 UniProt | EBI | MGI Sequence Detail 875 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(4) UniProt(7)
Polymorphisms SNPs within 2kb(246 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
InterPro IPR025313 Domain of unknown function DUF4217
InterPro IPR001650 Helicase, C-terminal
InterPro IPR014001 Helicase, superfamily 1/2, ATP-binding domain
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
InterPro IPR014014 RNA helicase, DEAD-box type, Q motif
Protein Ontology PR:000029381 ATP-dependent RNA helicase DDX10
Graphical View of Protein Domain Structure
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5
All references(34)
Other
accession IDs
MGI:2143106

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory