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R3hdm4 Gene Detail
Summary
  • Symbol
    R3hdm4
  • Name
    R3H domain containing 4
  • Synonyms
    C030046I01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924814
    NCBI Gene: 109284
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:79745886-79752764 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    220 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924814
 protein coding gene Chr10:79745886-79757042 (-)
129S1/SvImJ ENSMUSG00200042135
 protein coding gene Chr10:76369558-76380714 (-)
A/J ENSMUSG00195039188
 protein coding gene Chr10:76765055-76776212 (-)
AKR/J ENSMUSG00220044782
 protein coding gene Chr10:76362621-76373778 (-)
BALB/cJ ENSMUSG00180049118
 protein coding gene Chr10:76775535-76786693 (-)
C3H/HeJ ENSMUSG00175051958
 protein coding gene Chr10:76646275-76657433 (-)
C57BL/6NJ ENSMUSG00215048131
 protein coding gene Chr10:76387960-76399116 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015551
 protein coding gene Chr10:73891197-73898446 (-)
CAST/EiJ ENSTCUG00005050395
 protein coding gene Chr10:76272841-76283996 (-)
CBA/J ENSMUSG00210048818
 protein coding gene Chr10:76502354-76513510 (-)
DBA/2J ENSMUSG00185049605
 protein coding gene Chr10:76844733-76855889 (-)
FVB/NJ ENSMUSG00205040786
 protein coding gene Chr10:76557526-76568684 (-)
JF1/MsJ ENSUMUG00000048362
 protein coding gene Chr10:78075043-78086200 (-)
LP/J ENSMUSG00230048056
 protein coding gene Chr10:78614476-78625632 (-)
NOD/ShiLtJ ENSMUSG00190029934
 protein coding gene Chr10:76758487-76769643 (-)
NZO/HlLtJ ENSMUSG00225049921
 protein coding gene Chr10:82900848-82912005 (-)
PWK/PhJ ENSLUMG00010040194
 protein coding gene Chr10:76434574-76445714 (-)
SPRET/EiJ ENSMSPG00010037777
 protein coding gene Chr10:78055233-78066367 (-)
WSB/EiJ ENSIUOG00005050577
 protein coding gene Chr10:76462619-76473785 (-)



Homology
more
  • Human Ortholog
    R3HDM4, R3H domain containing 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    R3HDM4, R3H domain containing 4
  • Synonyms
    C19orf22
  • Links
    NCBI Gene ID: 91300
    UniProt: Q96D70

  • Chr Location
    19p13.3; chr19:896503-913245 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    1 involving R3hdm4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    25 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    598
  • Tissues
    1
  • cDNA Data
    86
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 109284 NCBI Gene Model | MGI Sequence Detail 6879 C57BL/6J ±  kb
transcript NM_001378997 RefSeq | MGI Sequence Detail 1840 C57BL/6  
polypeptide Q4VBF2 UniProt | EBI | MGI Sequence Detail 262 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 86
    cDNA 86

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143630
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory