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Wdr17 Gene Detail
Summary
  • Symbol
    Wdr17
  • Name
    WD repeat domain 17
  • Synonyms
    3010002I12Rik, B230207L18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924662
    NCBI Gene: 244484
Location & Maps
more
  • Sequence Map
    Chr8:54629055-54887184 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      258130 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.28 cM, cytoband B3.1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    WDR17, WD repeat domain 17
  • Vertebrate Orthologs
    10
  • Human Ortholog
    WDR17, WD repeat domain 17
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 116966
    neXtProt AC: NX_Q8IZU2

  • Chr Location
    4q34; chr4:176065834-176182828 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 12460
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: WDR17
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Wdr17
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026034 VEGA Gene Model | MGI Sequence Detail 258130 C57BL/6J ±  kb
transcript OTTMUST00000064256 VEGA | MGI Sequence Detail 4668 Not Applicable  
polypeptide OTTMUSP00000031884 VEGA | MGI Sequence Detail 1322 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1432 from dbSNP Build 142
Protein
Information
less
  • UniProt
    10 Sequences
  • InterPro Domains
    IPR020472 G-protein beta WD-40 repeat
    IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
    IPR001680 WD40 repeat
    IPR019775 WD40 repeat, conserved site
    IPR017986 WD40-repeat-containing domain
    IPR015943 WD40/YVTN repeat-like-containing domain
Molecular
Reagents
less
  • All nucleic 20
    cDNA 19
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919635
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory