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Wdr17 Gene Detail
Summary
  • Symbol
    Wdr17
  • Name
    WD repeat domain 17
  • Synonyms
    3010002I12Rik, B230207L18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924662
    NCBI Gene: 244484
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:54629611-54724518 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 29.28 cM, cytoband B3.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    567 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924662
protein coding gene Chr8:54629055-54887184 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033614
protein coding gene Chr8:54287573-54538510 (-)
A/J MGP_AJ_G0033596
protein coding gene Chr8:52007934-52251529 (-)
AKR/J MGP_AKRJ_G0033521
protein coding gene Chr8:53485778-53751862 (-)
BALB/cJ MGP_BALBcJ_G0033593
protein coding gene Chr8:52237440-52490790 (-)
C3H/HeJ MGP_C3HHeJ_G0033302
protein coding gene Chr8:54185024-54444750 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034109
protein coding gene Chr8:56300246-56570710 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031057
protein coding gene Chr8:47833931-48066316 (-)
CAST/EiJ MGP_CASTEiJ_G0032628
protein coding gene Chr8:53806014-54059235 (-)
CBA/J MGP_CBAJ_G0033281
protein coding gene Chr8:58361496-58634519 (-)
DBA/2J MGP_DBA2J_G0033434
protein coding gene Chr8:51805678-52058694 (-)
FVB/NJ MGP_FVBNJ_G0033375
protein coding gene Chr8:51153372-51403926 (-)
LP/J MGP_LPJ_G0033522
protein coding gene Chr8:54265183-54537042 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033419
protein coding gene Chr8:59588539-59960219 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034127
protein coding gene Chr8:53774445-54020934 (-)
PWK/PhJ MGP_PWKPhJ_G0032336
protein coding gene Chr8:51342209-51586078 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032172
protein coding gene Chr8:52860548-53121009 (-)
WSB/EiJ MGP_WSBEiJ_G0032744
protein coding gene Chr8:54017770-54274070 (-)



Homology
more
  • Human Ortholog
    WDR17, WD repeat domain 17
  • Vertebrate Orthologs
    10
  • Human Ortholog
    WDR17, WD repeat domain 17
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 116966
    neXtProt AC: NX_Q8IZU2
    UniProt: Q8IZU2

  • Chr Location
    4q34.2; chr4:176065834-176182828 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 12460
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: WDR17
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 244484 NCBI Gene Model | MGI Sequence Detail 94908 C57BL/6J ±  kb
transcript NM_001372372 RefSeq | MGI Sequence Detail 6658 C57BL/6  
polypeptide NP_001359299 RefSeq | MGI Sequence Detail 1307 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    10 Sequences
  • InterPro Domains
    IPR020472 G-protein beta WD-40 repeat
    IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
    IPR001680 WD40 repeat
    IPR019775 WD40 repeat, conserved site
    IPR017986 WD40-repeat-containing domain
    IPR036322 WD40-repeat-containing domain superfamily
    IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Molecular
Reagents
less
  • All nucleic 21
    cDNA 20
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919635
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory