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9530018H14Rik Gene Detail
Summary
  • Symbol
    9530018H14Rik
  • Name
    RIKEN cDNA 9530018H14 gene
  • Synonyms
    LncRNA-HIT
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924645
    NCBI Gene: 77395
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:52233198-52234440 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924645
 lncRNA gene Chr6:52233198-52234440 (-)
129S1/SvImJ MGP_129S1SvImJ_G0001919
 unclassified gene Chr6:51499785-51501027 (-)
A/J MGP_AJ_G0001896
 unclassified gene Chr6:49092058-49093300 (-)
AKR/J MGP_AKRJ_G0001883
 unclassified gene Chr6:50798361-50799603 (-)
BALB/cJ MGP_BALBcJ_G0001893
 unclassified gene Chr6:49453389-49454631 (-)
C3H/HeJ MGP_C3HHeJ_G0001870
 unclassified gene Chr6:50809812-50811054 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002014
 unclassified gene Chr6:52636681-52637923 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0001671
 unclassified gene Chr6:46739606-46740834 (-)
CAST/EiJ MGP_CASTEiJ_G0001837
 unclassified gene Chr6:50623238-50624479 (-)
CBA/J MGP_CBAJ_G0001863
 unclassified gene Chr6:54845084-54846326 (-)
DBA/2J MGP_DBA2J_G0001867
 unclassified gene Chr6:49014866-49016108 (-)
FVB/NJ MGP_FVBNJ_G0001875
 unclassified gene Chr6:48625923-48627165 (-)
LP/J MGP_LPJ_G0001922
 unclassified gene Chr6:51477006-51478248 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0001853
 unclassified gene Chr6:57463496-57464737 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002004
 unclassified gene Chr6:50727397-50728639 (-)
PWK/PhJ MGP_PWKPhJ_G0001800
 unclassified gene Chr6:48639427-48640667 (-)
SPRET/EiJ MGP_SPRETEiJ_G0001762
 unclassified gene Chr6:50064165-50065400 (-)
WSB/EiJ MGP_WSBEiJ_G0001863
 unclassified gene Chr6:50744141-50745383 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    731
  • Tissues
    24
  • cDNA Data
    1
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102373 Ensembl Gene Model | MGI Sequence Detail 1243 C57BL/6J ±  kb
transcript AK020562 GenBank | ENA | DDBJ | MGI Sequence Detail 1245 C57BL/6J  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 1
    Primer pair 3
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302776 Carlson HL, et al., Development and functional characterization of a lncRNA-HIT conditional loss of function allele. Genesis. 2020 Mar;58(3-4):e23351
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory