9430021M05Rik MGI Mouse Gene Detail - MGI:1924538

Sequence Map

Chr2:162503083-162517124 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1924538	lncRNA gene	Chr2:162501143-162522610 (+)
129S1/SvImJ	ENSMUSG00200017771	lncRNA gene	Chr2:159375354-159389385 (+)
A/J	ENSMUSG00195022820	lncRNA gene	Chr2:159737996-159752096 (+)
AKR/J	ENSMUSG00220014476	lncRNA gene	Chr2:159064050-159078094 (+)
BALB/cJ	ENSMUSG00180050246	lncRNA gene	Chr2:159191778-159205879 (+)
C3H/HeJ	ENSMUSG00175051929	lncRNA gene	Chr2:159941601-159955697 (+)
C57BL/6NJ	ENSMUSG00215039799	lncRNA gene	Chr2:159371147-159385199 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013620	unclassified non-coding RNA gene	Chr2:154494570-154500515 (+)
CAST/EiJ	ENSTCUG00005047894	lncRNA gene	Chr2:158291119-158305380 (+)
CBA/J	ENSMUSG00210017373	lncRNA gene	Chr2:159872652-159886753 (+)
DBA/2J	ENSMUSG00185050869	lncRNA gene	Chr2:159603481-159617537 (+)
FVB/NJ	ENSMUSG00205046179	lncRNA gene	Chr2:158632807-158646865 (+)
JF1/MsJ	ENSUMUG00000034215	lncRNA gene	Chr2:159224464-159238672 (+)
LP/J	ENSMUSG00230046231	lncRNA gene	Chr2:161149597-161163631 (+)
NOD/ShiLtJ	ENSMUSG00190047519	lncRNA gene	Chr2:159247609-159261657 (+)
NZO/HlLtJ	ENSMUSG00225053567	lncRNA gene	Chr2:169164762-169178805 (+)
PWK/PhJ	ENSLUMG00010048790	lncRNA gene	Chr2:159150857-159165133 (+)
SPRET/EiJ	ENSMSPG00010036476	lncRNA gene	Chr2:161931188-161945421 (+)
WSB/EiJ	ENSIUOG00005045555	lncRNA gene	Chr2:158999950-159014023 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	77288	NCBI Gene Model \| MGI Sequence Detail	14042	C57BL/6J	± kb
transcript	NR_033569	RefSeq \| MGI Sequence Detail	2148	C57BL/6
polypeptide	Q8BT43	UniProt \| EBI \| MGI Sequence Detail	103	Not Applicable

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Summaries

All 12
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for 9430021M05Rik:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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