About   Help   FAQ
Sccpdh Gene Detail
Summary
  • Symbol
    Sccpdh
  • Name
    saccharopine dehydrogenase (putative)
  • Synonyms
    C330023F11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924486
    NCBI Gene: 109232
Location & Maps
more
  • Sequence Map
    Chr1:179668210-179687189 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      18980 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 83.62 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SCCPDH, saccharopine dehydrogenase (putative)
  • Vertebrate Orthologs
    13
  • Human Ortholog
    SCCPDH, saccharopine dehydrogenase (putative)
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CGI-49, NET11
  • Links
    NCBI Gene ID: 51097
    neXtProt AC: NX_Q8NBX0

  • Chr Location
    1q44; chr1:246724076-246768137 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    2
  • Genomic Mutations
    2 involving Sccpdh
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021897 VEGA Gene Model | MGI Sequence Detail 18980 C57BL/6J ±  kb
transcript OTTMUST00000052000 VEGA | MGI Sequence Detail 1948 Not Applicable  
polypeptide OTTMUSP00000024557 VEGA | MGI Sequence Detail 429 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    84 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000029749 saccharopine dehydrogenase-like oxidoreductase
  • EC
  • InterPro Domains
    IPR016040 NAD(P)-binding domain
    IPR032095 Saccharopine dehydrogenase, C-terminal
    IPR005097 Saccharopine dehydrogenase, NADP binding domain
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 6
Other
Accession IDs
less
MGI:2138579
References
more
  • Summaries
    All 25
    Gene Ontology 5
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/17/2016
MGI 6.05
The Jackson Laboratory