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A930002I21Rik Gene Detail
Summary
  • Symbol
    A930002I21Rik
  • Name
    RIKEN cDNA A930002I21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924480
    NCBI Gene: 109226
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:107090880-107098401 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.61 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924480
lncRNA gene Chr3:107090880-107098401 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006272
lincRNA gene Chr3:108560073-108568504 (+)
A/J MGP_AJ_G0006265
lincRNA gene Chr3:105121028-105128633 (+)
AKR/J MGP_AKRJ_G0006241
lincRNA gene Chr3:107691529-107699020 (+)
BALB/cJ MGP_BALBcJ_G0006239
lincRNA gene Chr3:104817732-104825621 (+)
C3H/HeJ MGP_C3HHeJ_G0006191
lincRNA gene Chr3:108033446-108041795 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006404
lincRNA gene Chr3:112638446-112647866 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005703
lincRNA gene Chr3:101276389-101283868 (+)
CAST/EiJ MGP_CASTEiJ_G0006125
lincRNA gene Chr3:107392571-107401506 (+)
CBA/J MGP_CBAJ_G0006175
lincRNA gene Chr3:116425491-116435089 (+)
DBA/2J MGP_DBA2J_G0006196
lincRNA gene Chr3:104324308-104331955 (+)
FVB/NJ MGP_FVBNJ_G0006217
lincRNA gene Chr3:102204002-102211892 (+)
LP/J MGP_LPJ_G0006277
lincRNA gene Chr3:109980329-109987818 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006208
lincRNA gene Chr3:122560327-122568747 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006410
lincRNA gene Chr3:107273320-107280788 (+)
PWK/PhJ MGP_PWKPhJ_G0006065
lincRNA gene Chr3:104044571-104052212 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005976
lincRNA gene Chr3:105415793-105423256 (+)
WSB/EiJ MGP_WSBEiJ_G0006172
lincRNA gene Chr3:107806813-107816123 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050179 Ensembl Gene Model | MGI Sequence Detail 7522 C57BL/6J ±  kb
transcript ENSMUST00000060946 Ensembl | MGI Sequence Detail 1512 Not Applicable  
polypeptide Q8BFY1 UniProt | EBI | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
References
more
  • Summaries
    All 15
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory