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Tmem200a Gene Detail
Summary
  • Symbol
    Tmem200a
  • Name
    transmembrane protein 200A
  • Synonyms
    C030003D03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924470
    NCBI Gene: 77220
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:25867080-25955713 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 13.03 cM, cytoband A4
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    395 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924470
 protein coding gene Chr10:25788229-25955713 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017100
 protein coding gene Chr10:24032485-24124104 (-)
A/J MGP_AJ_G0017077
 protein coding gene Chr10:23287350-23377900 (-)
AKR/J MGP_AKRJ_G0017037
 protein coding gene Chr10:23681649-23773497 (-)
BALB/cJ MGP_BALBcJ_G0017040
 protein coding gene Chr10:23425491-23517546 (-)
C3H/HeJ MGP_C3HHeJ_G0016860
 protein coding gene Chr10:23891826-23982095 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017498
 protein coding gene Chr10:24780478-24872800 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015196
 protein coding gene Chr10:21933091-22024248 (-)
CAST/EiJ MGP_CASTEiJ_G0016439
 protein coding gene Chr10:23879836-23982656 (-)
CBA/J MGP_CBAJ_G0016834
 protein coding gene Chr10:25944822-26059073 (-)
DBA/2J MGP_DBA2J_G0016939
 protein coding gene Chr10:23031815-23120255 (-)
FVB/NJ MGP_FVBNJ_G0016934
 protein coding gene Chr10:22713628-22806278 (-)
LP/J MGP_LPJ_G0017016
 protein coding gene Chr10:24016591-24113595 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016964
 protein coding gene Chr10:25942959-26044895 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017534
 protein coding gene Chr10:23558813-23653222 (-)
PWK/PhJ MGP_PWKPhJ_G0016221
 protein coding gene Chr10:22821354-22925390 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016005
 protein coding gene Chr10:23371781-23375702 (-)
WSB/EiJ MGP_WSBEiJ_G0016502
 protein coding gene Chr10:23694033-23796576 (-)



Homology
more
  • Human Ortholog
    TMEM200A, transmembrane protein 200A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM200A, transmembrane protein 200A
  • Synonyms
    KIAA1913, TTMA, TTMC
  • Links
    NCBI Gene ID: 114801
    neXtProt AC: NX_Q86VY9
    UniProt: Q86VY9

  • Chr Location
    6q23.1; chr6:130365531-130443067 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 77220 NCBI Gene Model | MGI Sequence Detail 88634 C57BL/6J ±  kb
transcript NM_029881 RefSeq | MGI Sequence Detail 4125 Not Specified  
polypeptide Q8C817 UniProt | EBI | MGI Sequence Detail 491 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:338811 Qu F, et al., Three-dimensional molecular architecture of mouse organogenesis. Nat Commun. 2023 Jul 31;14(1):4599
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory