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Krtap5-3 Gene Detail
Summary
  • Symbol
    Krtap5-3
  • Name
    keratin associated protein 5-3
  • Synonyms
    A030007E19Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924465
    NCBI Gene: 77215
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:142201364-142203015 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 87.75 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924465
protein coding gene Chr7:142201364-142203015 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033248
protein coding gene Chr7:147412420-147413591 (+)
A/J MGP_AJ_G0033230
protein coding gene Chr7:143187536-143190432 (+)
AKR/J MGP_AKRJ_G0033162
protein coding gene Chr7:147187749-147188872 (+)
BALB/cJ MGP_BALBcJ_G0033231
protein coding gene Chr7:142935663-142936576 (+)
C3H/HeJ MGP_C3HHeJ_G0032946
protein coding gene Chr7:146915300-146918039 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033741
protein coding gene Chr7:152781531-152792545 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030716
protein coding gene Chr7:144367179-144368867 (+)
CAST/EiJ MGP_CASTEiJ_G0032274
protein coding gene Chr7:139235568-139236754 (+)
CBA/J MGP_CBAJ_G0032917
protein coding gene Chr7:157975812-157979216 (+)
DBA/2J MGP_DBA2J_G0033071
protein coding gene Chr7:141123857-141125337 (+)
FVB/NJ MGP_FVBNJ_G0033021
protein coding gene Chr7:141047987-141049690 (+)
LP/J MGP_LPJ_G0033165
protein coding gene Chr7:148921780-148922951 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033055
protein coding gene Chr7:158592300-158594290 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033761
protein coding gene Chr7:146138802-146141658 (+)
PWK/PhJ MGP_PWKPhJ_G0031980
protein coding gene Chr7:134431177-134433245 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031826
protein coding gene Chr7:132949498-132952267 (+)
WSB/EiJ MGP_WSBEiJ_G0032386
protein coding gene Chr7:147107483-147109655 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 77215 NCBI Gene Model | MGI Sequence Detail 1652 C57BL/6J ±  kb
transcript NM_023860 RefSeq | MGI Sequence Detail 1652 C57BL/6  
polypeptide Q9D226 UniProt | EBI | MGI Sequence Detail 196 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:139791 Wu DD, et al., Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair. BMC Evol Biol. 2008;8:241

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/07/2019
MGI 6.14
The Jackson Laboratory