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Ocel1 Gene Detail
Summary
  • Symbol
    Ocel1
  • Name
    occludin/ELL domain containing 1
  • Synonyms
    9430098E02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924340
    NCBI Gene: 77090
Location & Maps
more
  • Sequence Map
    Chr8:71371298-71379361 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      8064 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.43 cM, cytoband C1
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    OCEL1, occludin/ELL domain containing 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    OCEL1, occludin/ELL domain containing 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    FWP009, S863-9
  • Links
    NCBI Gene ID: 79629
    neXtProt AC: NX_Q9H607

  • Chr Location
    19p13.11; chr19:17226204-17229219 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Targeted
    2
  • Genomic Mutations
    1 involving Ocel1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022215 VEGA Gene Model | MGI Sequence Detail 8064 C57BL/6J ±  kb
transcript OTTMUST00000052806 VEGA | MGI Sequence Detail 1611 Not Applicable  
polypeptide OTTMUSP00000025081 VEGA | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    82 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000030624 occludin/ELL domain-containing protein 1
  • InterPro Domains
    IPR031176 ELL/occludin family
    IPR031182 Occludin/ELL domain-containing protein 1
    IPR010844 Occludin homology domain
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142513, MGI:2142588
References
more
  • Summaries
    All 26
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory