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Tmco4 Gene Detail
Summary
  • Symbol
    Tmco4
  • Name
    transmembrane and coiled-coil domains 4
  • Synonyms
    4632413C14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924306
    NCBI Gene: 77056
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:138972888-139059171 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 70.57 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    963 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924306
protein coding gene Chr4:138972106-139059173 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029009
protein coding gene Chr4:141778753-141867313 (+)
A/J MGP_AJ_G0028968
protein coding gene Chr4:135685882-135770742 (+)
AKR/J MGP_AKRJ_G0028920
protein coding gene Chr4:139574112-139661018 (+)
BALB/cJ MGP_BALBcJ_G0028992
protein coding gene Chr4:136362403-136448463 (+)
C3H/HeJ MGP_C3HHeJ_G0028706
protein coding gene Chr4:139946660-140035947 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029433
protein coding gene Chr4:146801977-146892042 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026704
protein coding gene Chr4:128658935-128741839 (+)
CAST/EiJ MGP_CASTEiJ_G0028138
protein coding gene Chr4:138122527-138215429 (+)
CBA/J MGP_CBAJ_G0028670
protein coding gene Chr4:151022732-151116435 (+)
DBA/2J MGP_DBA2J_G0028820
protein coding gene Chr4:136071112-136155264 (+)
FVB/NJ MGP_FVBNJ_G0028787
protein coding gene Chr4:135099712-135188021 (+)
LP/J MGP_LPJ_G0028919
protein coding gene Chr4:141854026-141947841 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028813
protein coding gene Chr4:154954646-155038845 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029471
protein coding gene Chr4:140099322-140188450 (+)
PWK/PhJ MGP_PWKPhJ_G0027859
protein coding gene Chr4:132930973-133014862 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027684
protein coding gene Chr4:135862586-135947986 (+)
WSB/EiJ MGP_WSBEiJ_G0028216
protein coding gene Chr4:140350469-140435393 (+)



Homology
more
  • Human Ortholog
    TMCO4, transmembrane and coiled-coil domains 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TMCO4, transmembrane and coiled-coil domains 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 255104
    neXtProt AC: NX_Q5TGY1
    UniProt: Q5TGY1

  • Chr Location
    1p36.13; chr1:19682213-19800385 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 57112
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TMCO4
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041143 Ensembl Gene Model | MGI Sequence Detail 86284 C57BL/6J ±  kb
transcript ENSMUST00000043042 Ensembl | MGI Sequence Detail 2922 Not Applicable  
polypeptide ENSMUSP00000041388 Ensembl | MGI Sequence Detail 631 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 4
Other
Accession IDs
less
MGI:2140278
References
more
  • Summaries
    All 26
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory