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Cep83 Gene Detail
Summary
  • Symbol
    Cep83
  • Name
    centrosomal protein 83
  • Synonyms
    2600001G24Rik, 4921537D05Rik, 5730513H21Rik, Ccdc41
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924298
    NCBI Gene: 77048
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:94688498-94790336 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 49.05 cM, cytoband C3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    472 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924298
protein coding gene Chr10:94688498-94790853 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017665
protein coding gene Chr10:96191290-96298493 (+)
A/J MGP_AJ_G0017644
protein coding gene Chr10:92808475-92913445 (+)
AKR/J MGP_AKRJ_G0017602
protein coding gene Chr10:95464149-95569509 (+)
BALB/cJ MGP_BALBcJ_G0017607
protein coding gene Chr10:93084412-93186334 (+)
C3H/HeJ MGP_C3HHeJ_G0017430
protein coding gene Chr10:95464715-95567804 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018064
protein coding gene Chr10:99381344-99488363 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015745
protein coding gene Chr10:88378787-88480598 (+)
CAST/EiJ MGP_CASTEiJ_G0016995
protein coding gene Chr10:95484322-95590171 (+)
CBA/J MGP_CBAJ_G0017399
protein coding gene Chr10:103487725-103599059 (+)
DBA/2J MGP_DBA2J_G0017505
protein coding gene Chr10:91908700-92014961 (+)
FVB/NJ MGP_FVBNJ_G0017497
protein coding gene Chr10:91141170-91243335 (+)
LP/J MGP_LPJ_G0017579
protein coding gene Chr10:96810613-96912995 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017528
protein coding gene Chr10:104689398-104800135 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018101
protein coding gene Chr10:95368127-95477528 (+)
PWK/PhJ MGP_PWKPhJ_G0016776
protein coding gene Chr10:91999829-92104053 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016564
protein coding gene Chr10:94166991-94275187 (+)
WSB/EiJ MGP_WSBEiJ_G0017054
protein coding gene Chr10:95341176-95444936 (+)



Homology
more
  • Human Ortholog
    CEP83, centrosomal protein 83
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CEP83, centrosomal protein 83
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CCDC41, NPHP18, NY-REN-58
  • Links
    NCBI Gene ID: 51134
    neXtProt AC: NX_Q9Y592
    UniProt: Q9Y592

  • Chr Location
    12q22; chr12:94268832-94459991 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9396
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CEP83
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human CEP83 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 77048 NCBI Gene Model | MGI Sequence Detail 101839 C57BL/6J ±  kb
transcript NM_029852 RefSeq | MGI Sequence Detail 3006 C57BL/6  
polypeptide Q9D5R3 UniProt | EBI | MGI Sequence Detail 692 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 53
    cDNA 53

    Microarray probesets 6
Other
Accession IDs
less
MGI:1917864, MGI:1919355
References
more
  • Summaries
    All 42
    Developmental Gene Expression 4
    Gene Ontology 6
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:206657 Ye X, et al., C2cd3 is critical for centriolar distal appendage assembly and ciliary vesicle docking in mammals. Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2164-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory