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1700061E18Rik Gene Detail
Summary
  • Symbol
    1700061E18Rik
  • Name
    RIKEN cDNA 1700061E18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1924241
    NCBI Gene: 76991
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:41954259-41955271 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 13, 20.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924241
lncRNA gene Chr13:41954259-41955271 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003183
antisense lncRNA gene Chr13:40306728-40307740 (+)
A/J MGP_AJ_G0003157
antisense lncRNA gene Chr13:38969683-38970695 (+)
AKR/J MGP_AKRJ_G0003139
antisense lncRNA gene Chr13:40038124-40039136 (+)
BALB/cJ MGP_BALBcJ_G0003145
antisense lncRNA gene Chr13:39160357-39161369 (+)
C3H/HeJ MGP_C3HHeJ_G0003101
antisense lncRNA gene Chr13:39895182-39896194 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003289
antisense lncRNA gene Chr13:41580970-41581982 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002817
antisense lncRNA gene Chr13:37098078-37099092 (+)
CAST/EiJ MGP_CASTEiJ_G0003069
antisense lncRNA gene Chr13:39705263-39706278 (+)
CBA/J MGP_CBAJ_G0003097
antisense lncRNA gene Chr13:43355275-43356287 (+)
DBA/2J MGP_DBA2J_G0003103
antisense lncRNA gene Chr13:38532928-38533940 (+)
FVB/NJ MGP_FVBNJ_G0003122
antisense lncRNA gene Chr13:38038068-38039080 (+)
LP/J MGP_LPJ_G0003178
antisense lncRNA gene Chr13:40562051-40563063 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003111
antisense lncRNA gene Chr13:43309255-43310267 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003289
antisense lncRNA gene Chr13:39672629-39673641 (+)
PWK/PhJ MGP_PWKPhJ_G0003027
antisense lncRNA gene Chr13:38623858-38624870 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002972
antisense lncRNA gene Chr13:38319878-38320887 (+)
WSB/EiJ MGP_WSBEiJ_G0003101
antisense lncRNA gene Chr13:39981899-39982899 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085759 Ensembl Gene Model | MGI Sequence Detail 1013 C57BL/6J ±  kb
transcript ENSMUST00000154159 Ensembl | MGI Sequence Detail 588 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory