3110035E14Rik Gene Detail

Summary

• Symbol
  3110035E14Rik
• Name
  RIKEN cDNA 3110035E14 gene
• Synonyms
  R75066

• Feature Type
  protein coding gene
• IDs
  MGI:1924232
  NCBI Gene: 76982

Location & Maps

• Sequence Map
  Chr1:9601199-9627143 bp, + strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    25945 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.08 cM
• Mapping Data
  2 experiments

Homology

• Human Ortholog
  C8orf46, chromosome 8 open reading frame 46

• Vertebrate Orthologs
  8

• Human Ortholog
  C8orf46, chromosome 8 open reading frame 46
  Orthology source: HomoloGene, HGNC
• Links
  HGNC:28498

  NCBI Gene ID: 254778

  neXtProt AC: NX_Q8TAG6

  
  
• Chr Location
  8q13.1; chr8:66493256-66518524 (+)  GRCh38.p2

---

• HomoloGene
  Vertebrate Homology Class 17666
  1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken
  
• HCOP
  human homology predictions: C8orf46
• Gene Tree
  3110035E14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Targeted
  2
• Incidental Mutations
  Mutagenetix , APF

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  16
• Literature Summary
  1

• Other Mouse Links
  Allen Institute
  GEO

Interactions

• 3110035E14Rik interacts with 287 markers (Mir1b, Mir7-1, Mir7-2, ...) View All

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS14813.1
• UniGene
  491098

• VEGA
  OTTMUSG00000022603 (Evidence)
• Ensembl
  ENSMUSG00000067879 (Evidence)
• NCBI Gene
  76982

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000022603	VEGA Gene Model | MGI Sequence Detail	25945	C57BL/6J
transcript	OTTMUST00000054142	VEGA | MGI Sequence Detail	3256	Not Applicable
polypeptide	OTTMUSP00000025798	VEGA | MGI Sequence Detail	207	Not Applicable

Polymorphisms

• SNPs within 2kb
  224 from dbSNP Build 142

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR027900 Protein of unknown function DUF4648

Molecular
Reagents

• All nucleic 16

  cDNA 16

  
  

  Microarray probesets 3

Other
Accession IDs

MGI:2138225, MGI:2138522, MGI:2138731

References

• Summaries
  All 25

  Developmental Gene Expression 1

  Phenotypes 5
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:225710 Tuck E, et al., A gene expression resource generated by genome-wide lacZ profiling in the mouse. Dis Model Mech. 2015 Nov 1;8(11):1467-78