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Vxn Gene Detail
Summary
  • Symbol
    Vxn
  • Name
    vexin
  • Synonyms
    3110035E14Rik, R75066
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924232
    NCBI Gene: 76982
  • Alliance
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:9601267-9627142 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 2.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    224 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924232
protein coding gene Chr1:9601199-9627143 (.)
129S1/SvImJ MGP_129S1SvImJ_G0015825
protein coding gene Chr1:6831830-6862798 (+)
A/J MGP_AJ_G0015807
protein coding gene Chr1:6906796-6933525 (+)
AKR/J MGP_AKRJ_G0015766
protein coding gene Chr1:6791744-6817231 (+)
BALB/cJ MGP_BALBcJ_G0015763
protein coding gene Chr1:6648152-6674102 (+)
C3H/HeJ MGP_C3HHeJ_G0015597
protein coding gene Chr1:6714436-6740015 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016217
protein coding gene Chr1:7169045-7197693 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013938
protein coding gene Chr1:5760694-5787922 (+)
CAST/EiJ MGP_CASTEiJ_G0015177
protein coding gene Chr1:6890739-6920177 (+)
CBA/J MGP_CBAJ_G0015570
protein coding gene Chr1:7326415-7351987 (+)
DBA/2J MGP_DBA2J_G0015669
protein coding gene Chr1:6536424-6563069 (+)
FVB/NJ MGP_FVBNJ_G0015674
protein coding gene Chr1:6449938-6477864 (+)
LP/J MGP_LPJ_G0015741
protein coding gene Chr1:7056297-7085090 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015693
protein coding gene Chr1:7967245-7995707 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016263
protein coding gene Chr1:6691360-6720271 (+)
PWK/PhJ MGP_PWKPhJ_G0014961
protein coding gene Chr1:6390572-6417934 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014741
protein coding gene Chr1:6862209-6887784 (+)
WSB/EiJ MGP_WSBEiJ_G0015241
protein coding gene Chr1:6717618-6746178 (+)



Homology
more
  • Human Ortholog
    VXN, vexin
  • Vertebrate Orthologs
    8
  • Human Ortholog
    VXN, vexin
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C8orf46
  • Links
    NCBI Gene ID: 254778
    neXtProt AC: NX_Q8TAG6
    UniProt: Q8TAG6

  • Chr Location
    8q13.1; chr8:66493256-66518524 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76982 NCBI Gene Model | MGI Sequence Detail 25876 C57BL/6J ±  kb
transcript NM_178399 RefSeq | MGI Sequence Detail 3187 C57BL/6  
polypeptide Q8BG31 UniProt | EBI | MGI Sequence Detail 207 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR027900 Vexin domain
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 3
Other
Accession IDs
less
MGI:2138225, MGI:2138522, MGI:2138731
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:259111 Moore KB, et al., C8orf46 homolog encodes a novel protein Vexin that is required for neurogenesis in Xenopus laevis. Dev Biol. 2018 May 1;437(1):27-40

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory