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2700049A03Rik
Gene Detail
 Symbol
Name
ID
2700049A03Rik
RIKEN cDNA 2700049A03 gene
MGI:1924217
Synonyms talpid3
Feature Type protein coding gene
Genetic Map
Chromosome 12
29.39 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:71136848-71243303 bp, + strand
From VEGA annotation of GRCm38

  106456 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8839  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 2 zebrafish

Gene Tree: 2700049A03Rik

Human
homologs
Human Homolog KIAA0586, KIAA0586
NCBI Gene ID 9786
neXtProt AC  NX_Q9BVV6
Human Synonyms  Talpid3
Human Chr (Location)  14q23.1; chr14:58427385-58548831 (+)  GRCh38
Alleles
and
phenotypes
All alleles(15) : Gene trapped(11) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null mutation die during organogenesis, lack cilia, and have randomized left-right patterning, pericardial edema, and hemorrhages.
 
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cell projection organization, cilium assembly, ...
Component centrosome, ciliary basal body, ...
Function protein binding
External Resources: FuncBase
Expression
cDNA source data(76)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(76) cDNA(76)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000033139 (Evidence)
Ensembl Gene ModelENSMUSG00000034601 (Evidence)
Entrez Gene76967 (Evidence)
UniGene87290
DFCITC1582707, TC1597773, TC1603495
DoTSDT.101386698, DT.55108589
NIA Mouse Gene IndexU014051
Consensus CDS ProjectCCDS49081.1, CCDS49082.1
International Mouse Knockout Project Status2700049A03Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033139 VEGA Gene Model | MGI Sequence Detail 106456 C57BL/6J ±  kb
transcript OTTMUST00000082871 VEGA | MGI Sequence Detail 5763 Not Applicable 
polypeptide OTTMUSP00000044471 VEGA | MGI Sequence Detail 1520 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(12) UniProt(7)
Polymorphisms SNPs within 2kb(434 from dbSNP Build 137)
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:208267 Kobayashi T, et al., The CP110-interacting proteins Talpid3 and Cep290 play overlapping and distinct roles in cilia assembly. J Cell Biol. 2014 Jan 20;204(2):215-29
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory