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Rnf225 Gene Detail
Summary
  • Symbol
    Rnf225
  • Name
    ring finger protein 225
  • Synonyms
    2310014L17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924198
    NCBI Gene: 381845
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:12927416-12931072 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 7.69 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    65 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924198
protein coding gene Chr7:12927416-12931072 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031657
protein coding gene Chr7:10325401-10329057 (+)
A/J MGP_AJ_G0031630
protein coding gene Chr7:10171715-10175372 (+)
AKR/J MGP_AKRJ_G0031553
protein coding gene Chr7:10401932-10405588 (+)
BALB/cJ MGP_BALBcJ_G0031635
protein coding gene Chr7:10285271-10288928 (+)
C3H/HeJ MGP_C3HHeJ_G0031357
protein coding gene Chr7:10494481-10498137 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032099
protein coding gene Chr7:10853185-10856841 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029193
protein coding gene Chr7:11770325-11774260 (+)
CAST/EiJ MGP_CASTEiJ_G0030715
protein coding gene Chr7:8054492-8058148 (+)
CBA/J MGP_CBAJ_G0031314
protein coding gene Chr7:11063724-11067380 (+)
DBA/2J MGP_DBA2J_G0031472
protein coding gene Chr7:10051753-10055409 (+)
FVB/NJ MGP_FVBNJ_G0031428
protein coding gene Chr7:10049064-10052714 (+)
LP/J MGP_LPJ_G0031559
protein coding gene Chr7:10417327-10420983 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031463
protein coding gene Chr7:11152674-11156324 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032129
protein coding gene Chr7:10181359-10185015 (+)
PWK/PhJ MGP_PWKPhJ_G0030443
protein coding gene Chr7:8539160-8542817 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030269
protein coding gene Chr7:6293668-6297326 (+)
WSB/EiJ MGP_WSBEiJ_G0030810
protein coding gene Chr7:10202185-10205842 (+)



Homology
more
  • Human Ortholog
    RNF225, ring finger protein 225
  • Vertebrate Orthologs
    6
  • Human Ortholog
    RNF225, ring finger protein 225
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 646862
    neXtProt AC: NX_M0QZC1
    UniProt: M0QZC1

  • Chr Location
    19q13.43; chr19:58395081-58398954 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 381845 NCBI Gene Model | MGI Sequence Detail 3657 C57BL/6J ±  kb
transcript NM_029809 RefSeq | MGI Sequence Detail 3257 C57BL/6  
polypeptide Q9D7D1 UniProt | EBI | MGI Sequence Detail 332 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR013083 Zinc finger, RING/FYVE/PHD-type
    IPR001841 Zinc finger, RING-type
    IPR017907 Zinc finger, RING-type, conserved site
Molecular
Reagents
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  • All nucleic 20
    cDNA 20

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142180, MGI:2142312
References
more
  • Summaries
    All 30
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory