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Arrdc5 Gene Detail
Summary
  • Symbol
    Arrdc5
  • Name
    arrestin domain containing 5
  • Synonyms
    1700013E09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924170
    NCBI Gene: 76920
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:56294111-56300286 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 29.26 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924170
protein coding gene Chr17:56294111-56300286 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023923
protein coding gene Chr17:57976526-57982704 (-)
A/J MGP_AJ_G0023881
protein coding gene Chr17:56392398-56398571 (-)
AKR/J MGP_AKRJ_G0023850
protein coding gene Chr17:57081934-57090327 (-)
BALB/cJ MGP_BALBcJ_G0023882
protein coding gene Chr17:56215172-56221345 (-)
C3H/HeJ MGP_C3HHeJ_G0023646
protein coding gene Chr17:57793025-57799202 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024328
protein coding gene Chr17:60242066-60248239 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021774
protein coding gene Chr17:52881182-52887835 (-)
CAST/EiJ MGP_CASTEiJ_G0023128
protein coding gene Chr17:58094953-58101143 (-)
CBA/J MGP_CBAJ_G0023622
protein coding gene Chr17:62574733-62581100 (-)
DBA/2J MGP_DBA2J_G0023750
protein coding gene Chr17:55102116-55108289 (-)
FVB/NJ MGP_FVBNJ_G0023716
protein coding gene Chr17:54633151-54639305 (-)
LP/J MGP_LPJ_G0023832
protein coding gene Chr17:58660167-58666337 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023744
protein coding gene Chr17:62088106-62094278 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024372
protein coding gene Chr17:57450252-57456425 (-)
PWK/PhJ MGP_PWKPhJ_G0022874
protein coding gene Chr17:54451740-54458340 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022685
protein coding gene Chr17:54207689-54213793 (-)
WSB/EiJ MGP_WSBEiJ_G0023194
protein coding gene Chr17:58056751-58062919 (-)



Homology
more
  • Human Ortholog
    ARRDC5, arrestin domain containing 5
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ARRDC5, arrestin domain containing 5
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 645432
    neXtProt AC: NX_A6NEK1
    UniProt: A6NEK1

  • Chr Location
    19p13.3; chr19:4867614-4915469 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76920 NCBI Gene Model | MGI Sequence Detail 6176 C57BL/6J ±  kb
transcript NM_029799 RefSeq | MGI Sequence Detail 1163 Not Specified  
polypeptide Q497K5 UniProt | EBI | MGI Sequence Detail 325 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory