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Rab36
Gene Detail
Symbol

Name
ID
Rab36
RAB36, member RAS oncogene family
MGI:1924127
Feature Type
protein coding gene
Genetic Map
Chromosome 10
38.49 cM, cytoband B5.3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr10:75037058-75054748 bp, + strand
From VEGA annotation of GRCm38

  17691 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3610  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RAB36
Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab36

Human
homologs
RAB36, RAB36, member RAS oncogene family
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 9609
neXtProt AC: NX_O95755

Human Chr (Location): 22q11.22; chr22:23145326-23169285 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF )
Interactions
Rab36 interacts with 239 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process intracellular protein transport, protein transport, ...
Component Golgi apparatus, membrane
Function GTPase activity, GTP binding, ...
External Resources: FuncBase
Expression
cDNA source data(23)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rab36    NEW 
Molecular
reagents
All nucleic(23) cDNA(23)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000027940 (Evidence)
Ensembl Gene Model ENSMUSG00000020175 (Evidence)
Entrez Gene 76877 (Evidence)
UniGene 133593
DFCI TC1620717, TC1591353, TC1582078
DoTS DT.99855933, DT.94251064, DT.91390593, DT.94292677, DT.55212204
NIA Mouse Gene Index U011653
Consensus CDS Project CCDS23923.1
International Mouse Phenotyping Consortium Status Rab36
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027940 VEGA Gene Model | MGI Sequence Detail 17691 C57BL/6J ±  kb
transcript OTTMUST00000069214 VEGA | MGI Sequence Detail 2952 Not Applicable 
polypeptide OTTMUSP00000035120 VEGA | MGI Sequence Detail 267 Not Applicable 

For the selected sequences
All sequences(79) RefSeq(23) UniProt(4)
Polymorphisms
SNPs within 2kb(50 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013612 ras-related protein Rab-36
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:2143798

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory