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Rab36
Gene Detail
Symbol

Name
ID
Rab36
RAB36, member RAS oncogene family
MGI:1924127
Feature Type
protein coding gene
Genetic Map
Chromosome 10
38.49 cM, cytoband B5.3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr10:75037058-75054748 bp, + strand
From VEGA annotation of GRCm38

  17691 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3610  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: Ras-related protein Rab
Gene Tree: Rab36

Human
homologs
Human Homolog RAB36, RAB36, member RAS oncogene family
NCBI Gene ID 9609
neXtProt AC  NX_O95755
Human Chr (Location)  22q11.22; chr22:23145326-23164344 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF )
Interactions
Rab36 interacts with 240 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process GTP catabolic process, intracellular protein transport, ...
Component Golgi apparatus, membrane
Function GDP binding, GTPase activity, ...
External Resources: FuncBase
Expression
cDNA source data(23)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(23) cDNA(23)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027940 (Evidence)
Ensembl Gene ModelENSMUSG00000020175 (Evidence)
Entrez Gene76877 (Evidence)
UniGene133593
DFCITC1591353, TC1582078, TC1620717
DoTSDT.99855933, DT.94292677, DT.55212204, DT.94251064, DT.91390593
NIA Mouse Gene IndexU011653
Consensus CDS ProjectCCDS23923.1
International Mouse Knockout Project StatusRab36
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027940 VEGA Gene Model | MGI Sequence Detail 17691 C57BL/6J ±  kb
transcript OTTMUST00000069210 VEGA | MGI Sequence Detail 3291 Not Applicable 
polypeptide OTTMUSP00000035118 VEGA | MGI Sequence Detail 267 Not Applicable 

For the selected sequences
All sequences(80) RefSeq(21) UniProt(7)
Polymorphisms
SNPs within 2kb(50 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR001806 Small GTPase superfamily
InterPro IPR003579 Small GTPase superfamily, Rab type
InterPro IPR005225 Small GTP-binding protein domain
Protein Ontology PR:000013612 ras-related protein Rab-36
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2143798

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory