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Rps9
Gene Detail
 Symbol
Name
ID
Rps9
ribosomal protein S9
MGI:1924096
Synonyms 3010033P07Rik
Feature Type protein coding gene
Genetic Map
Chromosome 7
2.13 cM, cytoband A1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:3703993-3706901 bp, + strand
From VEGA annotation of GRCm38

  2909 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68145  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Rps9

Human
homologs
Human Homolog RPS9, ribosomal protein S9
NCBI Gene ID 6203
neXtProt AC  NX_P46781
Human Synonyms  S9
Human Chr (Location)  19q13.4; chr19:54200827-54207647 (+)  GRCh38
Alleles
and
phenotypes
All alleles(30) : Gene trapped(27) Targeted(3)
Gene Ontology
(GO)
classifications
All GO classifications: (21 annotations)
Process positive regulation of cell proliferation, regulation of translation, ...
Component cytoplasm, cytosolic small ribosomal subunit, ...
Function poly(A) RNA binding, RNA binding, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (40)    Tissues (28)    Images (9)
Theiler Stages: 4, 17, 20, 21, 22
Assay TypeResults
RNA in situ 34
RT-PCR 6
cDNA source data(701)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(702) cDNA(701) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000022990 (Evidence)
Ensembl Gene ModelENSMUSG00000006333 (Evidence)
Entrez Gene76846 (Evidence)
UniGene13944
DFCITC1573731, TC1586641
DoTSDT.101187245, DT.101187257, DT.101741139, DT.94244341, DT.97339424
NIA Mouse Gene IndexU007609, U223694
Consensus CDS ProjectCCDS20726.1
International Mouse Knockout Project StatusRps9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022990 VEGA Gene Model | MGI Sequence Detail 2909 C57BL/6J ±  kb
transcript OTTMUST00000055345 VEGA | MGI Sequence Detail 755 Not Applicable 
polypeptide OTTMUSP00000026495 VEGA | MGI Sequence Detail 194 Not Applicable 

For the selected sequences
All sequences(73) RefSeq(5) UniProt(7)
Polymorphisms SNPs within 2kb(72 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018079 Ribosomal protein S4, conserved site
InterPro IPR022801 Ribosomal protein S4/S9
InterPro IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal
InterPro IPR001912 Ribosomal protein S4/S9, N-terminal
InterPro IPR002942 RNA-binding S4 domain
Protein Ontology PR:000014292 40S ribosomal protein S9
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(40)
Other
accession IDs
MGI:2142087, MGI:2142089

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory