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Rps9
Gene Detail
Symbol

Name
ID
Rps9
ribosomal protein S9
MGI:1924096
Synonyms
3010033P07Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
2.13 cM, cytoband A1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:3703993-3706901 bp, + strand
From VEGA annotation of GRCm38

  2909 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68145  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

HCOP human homology predictions: RPS9
Gene Tree: Rps9

Human
homologs
RPS9, ribosomal protein S9
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 6203
neXtProt AC: NX_P46781

Human Synonyms: S9

Human Chr (Location): 19q13.4; chr19:54200557-54207647 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(30) : Gene trapped(27) Targeted(3)
Incidental mutations (data from CvDC )
Interactions
Rps9 interacts with 109 markers (Mir7-2, Mir7b, Mir18, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (6 records)
Data Summary: Results (36)    Tissues (26)    Images (9)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 34
RT-PCR 2
cDNA source data(701)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rps9    NEW 
Molecular
reagents
All nucleic(702) cDNA(701) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000022990 (Evidence)
Ensembl Gene Model ENSMUSG00000006333 (Evidence)
Entrez Gene 76846 (Evidence)
UniGene 13944
DFCI TC1573731, TC1586641
DoTS DT.97339424, DT.94244341, DT.101741139, DT.101187245, DT.101187257
NIA Mouse Gene Index U007609, U223694
Consensus CDS Project CCDS20726.1
International Mouse Phenotyping Consortium Status Rps9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022990 VEGA Gene Model | MGI Sequence Detail 2909 C57BL/6J ±  kb
transcript OTTMUST00000055345 VEGA | MGI Sequence Detail 755 Not Applicable 
polypeptide OTTMUSP00000026495 VEGA | MGI Sequence Detail 194 Not Applicable 

For the selected sequences
All sequences(73) RefSeq(5) UniProt(7)
Polymorphisms
SNPs within 2kb(72 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018079 Ribosomal protein S4, conserved site
InterPro IPR022801 Ribosomal protein S4/S9
InterPro IPR005710 Ribosomal protein S4/S9, eukaryotic/archaeal
InterPro IPR001912 Ribosomal protein S4/S9, N-terminal
InterPro IPR002942 RNA-binding S4 domain
Protein Ontology PR:000014292 40S ribosomal protein S9
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:216142 Amann R, et al., The FgfrL1 receptor is required for development of slow muscle fibers. Dev Biol. 2014 Oct 15;394(2):228-41
All references(41)
Other
accession IDs
MGI:2142087, MGI:2142089

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory