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Armc6 Gene Detail
Summary
  • Symbol
    Armc6
  • Name
    armadillo repeat containing 6
  • Synonyms
    2410153K17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924063
    NCBI Gene: 76813
  • Gene Overview
    MyGene.info: ARMC6
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70220172-70234422 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.15 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    73 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924063
protein coding gene Chr8:70220172-70234466 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033696
protein coding gene Chr8:70481678-70494536 (-)
A/J MGP_AJ_G0033679
protein coding gene Chr8:67611509-67626881 (-)
AKR/J MGP_AKRJ_G0033604
protein coding gene Chr8:69532116-69552739 (-)
BALB/cJ MGP_BALBcJ_G0033675
protein coding gene Chr8:67836796-67849708 (-)
C3H/HeJ MGP_C3HHeJ_G0033385
protein coding gene Chr8:70182729-70196009 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034192
protein coding gene Chr8:73147838-73162148 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031136
protein coding gene Chr8:62428237-62441598 (-)
CAST/EiJ MGP_CASTEiJ_G0032710
protein coding gene Chr8:69661252-69677788 (-)
CBA/J MGP_CBAJ_G0033363
protein coding gene Chr8:75776472-75789350 (-)
DBA/2J MGP_DBA2J_G0033517
protein coding gene Chr8:67335675-67348646 (-)
FVB/NJ MGP_FVBNJ_G0033458
protein coding gene Chr8:66442008-66455429 (-)
LP/J MGP_LPJ_G0033604
protein coding gene Chr8:70507902-70520918 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033501
protein coding gene Chr8:78438100-78456056 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034210
protein coding gene Chr8:69716915-69735050 (-)
PWK/PhJ MGP_PWKPhJ_G0032418
protein coding gene Chr8:66624841-66639784 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032254
protein coding gene Chr8:68689394-68703275 (-)
WSB/EiJ MGP_WSBEiJ_G0032825
protein coding gene Chr8:70083305-70096225 (-)



Homology
more
  • Human Ortholog
    ARMC6, armadillo repeat containing 6
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ARMC6, armadillo repeat containing 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    R30923_1
  • Links
    NCBI Gene ID: 93436
    neXtProt AC: NX_Q6NXE6
    UniProt: Q6NXE6

  • Chr Location
    19p13.11; chr19:19033578-19058178 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76813 NCBI Gene Model | MGI Sequence Detail 14251 C57BL/6J ±  kb
transcript NM_133972 RefSeq | MGI Sequence Detail 2215 C57BL/6  
polypeptide Q8BNU0 UniProt | EBI | MGI Sequence Detail 468 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142807
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory