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Rpl18a Gene Detail
Summary
  • Symbol
    Rpl18a
  • Name
    ribosomal protein L18A
  • Synonyms
    2510019J09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924058
    NCBI Gene: 76808
  • Gene Overview
    MyGene.info: RPL18A
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:70894722-70897412 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924058
protein coding gene Chr8:70894722-70897443 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033734
protein coding gene Chr8:71209646-71212431 (-)
A/J MGP_AJ_G0033717
protein coding gene Chr8:68300522-68303151 (-)
AKR/J MGP_AKRJ_G0033642
protein coding gene Chr8:70272757-70275541 (-)
BALB/cJ MGP_BALBcJ_G0033713
protein coding gene Chr8:68534517-68537215 (-)
C3H/HeJ MGP_C3HHeJ_G0033423
protein coding gene Chr8:70906411-70910042 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034230
protein coding gene Chr8:73888289-73892706 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031173
protein coding gene Chr8:63119112-63121823 (-)
CAST/EiJ MGP_CASTEiJ_G0032748
protein coding gene Chr8:70385908-70388715 (-)
CBA/J MGP_CBAJ_G0033401
protein coding gene Chr8:76546927-76559029 (-)
DBA/2J MGP_DBA2J_G0033555
protein coding gene Chr8:68020060-68022845 (-)
FVB/NJ MGP_FVBNJ_G0033496
protein coding gene Chr8:67160021-67162955 (-)
LP/J MGP_LPJ_G0033642
protein coding gene Chr8:71225689-71228474 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033539
protein coding gene Chr8:79179411-79189226 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034248
protein coding gene Chr8:70444007-70446946 (-)
PWK/PhJ MGP_PWKPhJ_G0032455
protein coding gene Chr8:67317524-67320802 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032292
protein coding gene Chr8:69419161-69421946 (-)
WSB/EiJ MGP_WSBEiJ_G0032863
protein coding gene Chr8:70805925-70808617 (-)



Homology
more
  • Human Ortholog
    RPL18A, ribosomal protein L18a
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPL18A, ribosomal protein L18a
    Orthology source: HomoloGene, HGNC
  • Synonyms
    L18A
  • Links
    NCBI Gene ID: 6142
    neXtProt AC: NX_Q02543
    UniProt: Q02543

  • Chr Location
    19p13.11; chr19:17859878-17863324 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045128 Ensembl Gene Model | MGI Sequence Detail 2691 C57BL/6J ±  kb
transcript ENSMUST00000212796 Ensembl | MGI Sequence Detail 679 Not Applicable  
polypeptide ENSMUSP00000148671 Ensembl | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR028877 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a
    IPR021138 60S ribosomal protein L18a/ L20, eukaryotes
    IPR023573 Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:263419 Distler U, et al., In-depth protein profiling of the postsynaptic density from mouse hippocampus using data-independent acquisition proteomics. Proteomics. 2014 Nov;14(21-22):2607-13

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory