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Tbc1d9b Gene Detail
Summary
  • Symbol
    Tbc1d9b
  • Name
    TBC1 domain family, member 9B
  • Synonyms
    2700008N14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1924045
    NCBI Gene: 76795
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:50131396-50172785 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 30.28 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1924045
 protein coding gene Chr11:50131059-50172785 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018241
 protein coding gene Chr11:49290037-49333965 (+)
A/J MGP_AJ_G0018209
 protein coding gene Chr11:47401755-47443182 (+)
AKR/J MGP_AKRJ_G0018179
 protein coding gene Chr11:48910232-48954934 (+)
BALB/cJ MGP_BALBcJ_G0018179
 protein coding gene Chr11:47682102-47724339 (+)
C3H/HeJ MGP_C3HHeJ_G0017992
 protein coding gene Chr11:48911477-48953077 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018630
 protein coding gene Chr11:50753530-50796636 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016282
 protein coding gene Chr11:45022776-45062364 (+)
CAST/EiJ MGP_CASTEiJ_G0017554
 protein coding gene Chr11:48885541-48926929 (+)
CBA/J MGP_CBAJ_G0017967
 protein coding gene Chr11:53099635-53140746 (+)
DBA/2J MGP_DBA2J_G0018074
 protein coding gene Chr11:47202426-47243982 (+)
FVB/NJ MGP_FVBNJ_G0018068
 protein coding gene Chr11:46824864-46865907 (+)
LP/J MGP_LPJ_G0018149
 protein coding gene Chr11:49629184-49672810 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018093
 protein coding gene Chr11:54640396-54685501 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018674
 protein coding gene Chr11:49018363-49061010 (+)
PWK/PhJ MGP_PWKPhJ_G0017332
 protein coding gene Chr11:47600941-47641263 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017127
 protein coding gene Chr11:48708963-48749887 (+)
WSB/EiJ MGP_WSBEiJ_G0017607
 protein coding gene Chr11:48658860-48700666 (+)



Homology
more
  • Human Ortholog
    TBC1D9B, TBC1 domain family member 9B
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TBC1D9B, TBC1 domain family member 9B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GRAMD9B
  • Links
    NCBI Gene ID: 23061
    neXtProt AC: NX_Q66K14
    UniProt: Q66K14

  • Chr Location
    5q35.3; chr5:179862071-179907856 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    14
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036644 Ensembl Gene Model | MGI Sequence Detail 41390 C57BL/6J ±  kb
transcript ENSMUST00000101270 Ensembl | MGI Sequence Detail 5213 Not Applicable  
polypeptide ENSMUSP00000098828 Ensembl | MGI Sequence Detail 1263 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 5
Other
Accession IDs
less
MGI:2144393
References
more
  • Summaries
    All 31
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:282340 Nishino H, et al., The LMTK1-TBC1D9B-Rab11A Cascade Regulates Dendritic Spine Formation via Endosome Trafficking. J Neurosci. 2019 Nov 27;39(48):9491-9502
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/16/2021
MGI 6.16 		The Jackson Laboratory