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Cluap1
Gene Detail
Symbol

Name
ID
Cluap1
clusterin associated protein 1
MGI:1924029
Synonyms
2310030D15Rik, 2610111M03Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 16
2.30 cM, cytoband A1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:3908801-3941147 bp, + strand
From VEGA annotation of GRCm38

  32347 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:14831  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Cluap1

Human
homologs
Human Homolog CLUAP1, clusterin associated protein 1
NCBI Gene ID 23059
neXtProt AC  NX_Q96AJ1
Human Synonyms  CFAP22, FAP22
Human Chr (Location)  16p13.3; chr16:3500945-3539048 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutant mice exhibit mid-gestation lethality, failure of embryonic turning, enlarged pericardial sacs, neural tube defects and lack primary cilia.
 
Interactions
Cluap1 interacts with 175 markers (Mir1a-1, Mir1a-2, Mir9-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process axoneme assembly, cell projection organization, ...
Component axoneme, cell, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (30)    Tissues (4)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 30
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000042236 (Evidence)
Ensembl Gene ModelENSMUSG00000014232 (Evidence)
Entrez Gene76779 (Evidence)
DFCITC1581046, TC1643227
Consensus CDS ProjectCCDS27912.1
International Mouse Knockout Project StatusCluap1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042236 VEGA Gene Model | MGI Sequence Detail 32347 C57BL/6J ±  kb
transcript OTTMUST00000056702 VEGA | MGI Sequence Detail 1779 Not Applicable 
polypeptide OTTMUSP00000027282 VEGA | MGI Sequence Detail 413 Not Applicable 

For the selected sequences
All sequences(58) RefSeq(16) UniProt(11)
Polymorphisms
SNPs within 2kb(152 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019366 Clusterin-associated protein-1
Protein Ontology PR:000005616 clusterin-associated protein 1
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:200709 Botilde Y, et al., Cluap1 localizes preferentially to the base and tip of cilia and is required for ciliogenesis in the mouse embryo. Dev Biol. 2013 Sep 1;381(1):203-12
All references(29)
Other
accession IDs
MGI:1916868

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory