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Slc10a7
Gene Detail
Symbol

Name
ID
Slc10a7
solute carrier family 10 (sodium/bile acid cotransporter family), member 7
MGI:1924025
Synonyms
2410193C02Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 8
37.04 cM, cytoband C3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:78509335-78734005 bp, + strand
From NCBI annotation of GRCm38

  224671 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:81628  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: uncharacterized protein with sodium bile acid symporter domain
Gene Tree: Slc10a7

Human
homologs
Human Homolog SLC10A7, solute carrier family 10, member 7
NCBI Gene ID 84068
neXtProt AC  NX_Q0GE19
Human Synonyms  C4orf13, P7
Human Chr (Location)  chr4:146253985-146521971 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(120) : Gene trapped(118) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc10a7 interacts with 328 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process ion transport, sodium ion transport, ...
Component integral component of membrane, membrane
Function symporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(36)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(37) cDNA(36) Primer pair(1)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000031684 (Evidence)
Entrez Gene76775 (Evidence)
UniGene334631
DFCITC1577380, TC1588800, TC1625049, TC1630370
DoTSDT.101234416, DT.101299426, DT.110861477, DT.110861491, DT.111164140, DT.50315019, DT.91348327, DT.94189290, DT.99843797
NIA Mouse Gene IndexU009525
Consensus CDS ProjectCCDS40395.1
International Mouse Knockout Project StatusSlc10a7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 76775 NCBI Gene Model | MGI Sequence Detail 224671 C57BL/6J ±  kb
transcript NM_029736 RefSeq | MGI Sequence Detail 3644 C57BL/6 
polypeptide Q5PT53 UniProt | EBI | MGI Sequence Detail 340 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(21) UniProt(2)
Polymorphisms
SNPs within 2kb(1734 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR016833 Putative sodium bile acid cotransporter
Protein Ontology PR:000014923 sodium/bile acid cotransporter 7
Graphical View of Protein Domain Structure
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory