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2010005H15Rik
Gene Detail
Symbol

Name
ID
2010005H15Rik
RIKEN cDNA 2010005H15 gene
MGI:1924020
Feature Type
protein coding gene
Genetic Map
Chromosome 16
25.44 cM, cytoband B3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr16:36221468-36257444 bp, + strand
From VEGA annotation of GRCm38

  35977 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3819  Vertebrate Homology Class
1 human; 3 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: 2010005H15Rik

Human
homologs
Human Homolog CSTA, cystatin A (stefin A)
NCBI Gene ID 1475
neXtProt AC  NX_P01040
Human Synonyms  AREI, STF1, STFA
Human Chr (Location)  3q21; chr3:122325164-122341969 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human CSTA
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process negative regulation of endopeptidase activity
Component cornified envelope, cytoplasm, ...
Function cysteine-type endopeptidase inhibitor activity, protease binding, ...
External Resources: FuncBase
Expression
cDNA source data(3)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(3) cDNA(3)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000045936 (Evidence)
Ensembl Gene ModelENSMUSG00000095620 (Evidence)
Entrez Gene76770 (Evidence)
UniGene327617
DoTSDT.55204476
Consensus CDS ProjectCCDS37330.1
International Mouse Knockout Project Status2010005H15Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000045936 VEGA Gene Model | MGI Sequence Detail 35977 C57BL/6J ±  kb
transcript OTTMUST00000119987 VEGA | MGI Sequence Detail 639 Not Applicable 
polypeptide OTTMUSP00000066556 VEGA | MGI Sequence Detail 97 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(4) UniProt(2)
Polymorphisms
SNPs within 2kb(236 from dbSNP Build 137)    SNPs within 2kb including multiple locations(242)
Protein-related
information
ResourceIDDescription
InterPro IPR001713 Proteinase inhibitor I25A, stefin A
InterPro IPR000010 Proteinase inhibitor I25, cystatin
InterPro IPR018073 Proteinase inhibitor I25, cystatin, conserved site
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(17)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory