About   Help   FAQ
Tceal6 Gene Detail
Summary
  • Symbol
    Tceal6
  • Name
    transcription elongation factor A (SII)-like 6
  • Synonyms
    1500026B10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923939
    NCBI Gene: 66104
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:134109436-134111436 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 56.70 cM, cytoband E3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923939
protein coding gene ChrX:134109435-134111436 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0036081
protein coding gene ChrX:133468418-133470395 (+)
AKR/J MGP_AKRJ_G0035982
protein coding gene ChrX:136125395-136127307 (-)
BALB/cJ MGP_BALBcJ_G0036071
protein coding gene ChrX:131855881-131857876 (+)
C3H/HeJ MGP_C3HHeJ_G0035757
protein coding gene ChrX:132494381-132496597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036595
protein coding gene ChrX:137967772-137969019 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033418
protein coding gene ChrX:124961037-124974185 (-)
CAST/EiJ MGP_CASTEiJ_G0035045
protein coding gene ChrX:113383118-113387952 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0035913
protein coding gene ChrX:132770933-132773108 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0036000
protein coding gene ChrX:134493791-134508189 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035882
protein coding gene ChrX:149512169-149517732 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036625
protein coding gene ChrX:132922314-132923179 (-)
PWK/PhJ MGP_PWKPhJ_G0034755
protein coding gene ChrX:111390996-111393930 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TCEAL3, transcription elongation factor A like 3
  • Synonyms
    WEX8
  • Links
    NCBI Gene ID: 85012
    neXtProt AC: NX_Q969E4
    UniProt: Q969E4

  • Chr Location
    Xq22.2; chrX:103607906-103609927 (+)  GRCh38.p7

  • Human Ortholog
    TCEAL5, transcription elongation factor A like 5
  • Synonyms
    WEX4
  • Links
    NCBI Gene ID: 340543
    neXtProt AC: NX_Q5H9L2
    UniProt: Q5H9L2

  • Chr Location
    Xq22.1; chrX:103273690-103276869 (-)  GRCh38.p7

  • Human Ortholog
    TCEAL6, transcription elongation factor A like 6
  • Synonyms
    Tceal3, WEX2
  • Links
    NCBI Gene ID: 158931
    UniProt: Q6IPX3

  • Chr Location
    Xq22.1; chrX:102139961-102142416 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031409 Ensembl Gene Model | MGI Sequence Detail 2001 C57BL/6J ±  kb
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR021156 Transcription elongation factor A-like/Brain expressed X-linked
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:210663 Zhou J, et al., Respiratory failure, cleft palate and epilepsy in the mouse model of human Xq22.1 deletion syndrome. Hum Mol Genet. 2014 Jul 15;23(14):3823-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/10/2022
MGI 6.19
The Jackson Laboratory