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1700113A16Rik Gene Detail
Summary
  • Symbol
    1700113A16Rik
  • Name
    RIKEN cDNA 1700113A16 gene
  • Synonyms
    2210408E11Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1923892
    NCBI Gene: 76642
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:88171560-88177785 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 38.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923892
antisense lncRNA gene Chr3:88171556-88177785 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003771
antisense lncRNA gene Chr3:88317250-88324660 (-)
A/J MGP_AJ_G0003751
antisense lncRNA gene Chr3:85318418-85324846 (-)
AKR/J MGP_AKRJ_G0003728
antisense lncRNA gene Chr3:87413616-87419552 (-)
BALB/cJ MGP_BALBcJ_G0003740
antisense lncRNA gene Chr3:85412347-85418645 (-)
C3H/HeJ MGP_C3HHeJ_G0003687
antisense lncRNA gene Chr3:87701388-87709494 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003881
antisense lncRNA gene Chr3:91564798-91574568 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003385
antisense lncRNA gene Chr3:80945195-80951162 (-)
CAST/EiJ MGP_CASTEiJ_G0003650
antisense lncRNA gene Chr3:87906139-87912942 (-)
CBA/J MGP_CBAJ_G0003683
antisense lncRNA gene Chr3:94681335-94694271 (-)
DBA/2J MGP_DBA2J_G0003692
antisense lncRNA gene Chr3:84805507-84811805 (-)
FVB/NJ MGP_FVBNJ_G0003713
antisense lncRNA gene Chr3:83082633-83088482 (-)
LP/J MGP_LPJ_G0003772
antisense lncRNA gene Chr3:89284676-89292792 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003701
antisense lncRNA gene Chr3:100923845-100931414 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003882
antisense lncRNA gene Chr3:87174689-87183011 (-)
PWK/PhJ MGP_PWKPhJ_G0003607
antisense lncRNA gene Chr3:84604190-84610714 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003549
antisense lncRNA gene Chr3:86352871-86358612 (-)
WSB/EiJ MGP_WSBEiJ_G0003686
antisense lncRNA gene Chr3:87530737-87538474 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    22
  • Chemically induced (other)
    1
  • Gene trapped
    20
  • Radiation induced
    1
  • Genomic Mutations
    2 involving 1700113A16Rik
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 76642 NCBI Gene Model | MGI Sequence Detail 6226 C57BL/6J ±  kb
transcript NR_045997 RefSeq | MGI Sequence Detail 983 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:1917429, MGI:2139564
References
more
  • Summaries
    All 18
    Diseases 1
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory