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Lrmda Gene Detail
Summary
  • Symbol
    Lrmda
  • Name
    leucine rich melanocyte differentiation associated
  • Synonyms
    1700112E06Rik, 2700009F18Rik, Oca7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923883
    NCBI Gene: 76633
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr14:22019712-23056085 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      1036374 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 12.03 cM, cytoband B
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    LRMDA, leucine rich melanocyte differentiation associated
  • Vertebrate Orthologs
    9
  • Human Ortholog
    LRMDA, leucine rich melanocyte differentiation associated
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C10orf11, CDA017
  • Links
    NCBI Gene ID: 83938
    neXtProt AC: NX_Q9H2I8
    UniProt: Q9H2I8

  • Chr Location
    10q22.2-q22.3; chr10:75431646-76559220 (+)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human LRMDA associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000034628 VEGA Gene Model | MGI Sequence Detail 1036374 C57BL/6J ±  kb
    transcript OTTMUST00000087883 VEGA | MGI Sequence Detail 908 Not Applicable  
    polypeptide OTTMUSP00000047866 VEGA | MGI Sequence Detail 229 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      5406 from dbSNP Build 142
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • InterPro Domains
      IPR001611 Leucine-rich repeat
      IPR032675 Leucine-rich repeat domain superfamily
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 5

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:1919796
    References
    more
    • Summaries
      All 30
      Developmental Gene Expression 1
      Gene Ontology 3
      Phenotypes 6
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    05/15/2018
    MGI 6.12
    The Jackson Laboratory