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Hoxd3os1 Gene Detail
Summary
  • Symbol
    Hoxd3os1
  • Name
    homeobox D3, opposite strand 1
  • Synonyms
    1700064D17Rik, 1700109F18Rik
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:1923875
    NCBI Gene: 73429
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:74710044-74716130 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 44.13 cM, cytoband D
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923875
antisense lncRNA gene Chr2:74703248-74716130 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003594
antisense lncRNA gene Chr2:75017424-75029953 (-)
A/J MGP_AJ_G0003576
antisense lncRNA gene Chr2:72084549-72097276 (-)
AKR/J MGP_AKRJ_G0003554
antisense lncRNA gene Chr2:74037766-74050631 (-)
BALB/cJ MGP_BALBcJ_G0003565
antisense lncRNA gene Chr2:72271175-72284540 (-)
C3H/HeJ MGP_C3HHeJ_G0003512
antisense lncRNA gene Chr2:74225604-74238682 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003703
antisense lncRNA gene Chr2:77253189-77266988 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003212
antisense lncRNA gene Chr2:69507774-69520494 (-)
CAST/EiJ MGP_CASTEiJ_G0003475
antisense lncRNA gene Chr2:74542586-74555777 (-)
CBA/J MGP_CBAJ_G0003509
antisense lncRNA gene Chr2:80072712-80089807 (-)
DBA/2J MGP_DBA2J_G0003517
antisense lncRNA gene Chr2:71691095-71704768 (-)
FVB/NJ MGP_FVBNJ_G0003537
antisense lncRNA gene Chr2:71081256-71093243 (-)
LP/J MGP_LPJ_G0003590
antisense lncRNA gene Chr2:74881555-74894333 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003525
antisense lncRNA gene Chr2:81986334-82000691 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003705
antisense lncRNA gene Chr2:74153300-74167145 (-)
PWK/PhJ MGP_PWKPhJ_G0003430
antisense lncRNA gene Chr2:71622002-71635222 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003374
antisense lncRNA gene Chr2:74387116-74399814 (-)
WSB/EiJ MGP_WSBEiJ_G0003509
antisense lncRNA gene Chr2:74589236-74604844 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    43 phenotype references
  • All Mutations and Alleles
    30
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    27
  • Genomic Mutations
    30 involving Hoxd3os1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 73429 NCBI Gene Model | MGI Sequence Detail 6087 C57BL/6J ±  kb
transcript NR_027899 RefSeq | MGI Sequence Detail 794 C57BL/6  
polypeptide Q8C6K5 UniProt | EBI | MGI Sequence Detail 144 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
less
MGI:1920679
References
more
  • Summaries
    All 60
    Developmental Gene Expression 1
    Phenotypes 43
  • Earliest
    J:10491 Davisson MT, et al., The mouse mutation ulnaless on chromosome 2. J Hered. 1990 Mar-Apr;81(2):151-3
  • Latest
    J:268053 Yakushiji-Kaminatsui N, et al., Similarities and differences in the regulation of HoxD genes during chick and mouse limb development. PLoS Biol. 2018 Nov;16(11):e3000004

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory