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1700034O15Rik
Gene Detail
Symbol

Name
ID
1700034O15Rik
RIKEN cDNA 1700034O15 gene
MGI:1923856
Feature Type
protein coding gene
Genetic Map
Chromosome 6
19.86 cM, cytoband B2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:41684431-41685717 bp, + strand
From VEGA annotation of GRCm38

  1287 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:81932  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog

HCOP human homology predictions: C7orf34
Gene Tree: 1700034O15Rik

Human
homologs
C7orf34, chromosome 7 open reading frame 34
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 135927
neXtProt AC: NX_Q96L11

Human Synonyms: ctm-1

Human Chr (Location): 7q34; chr7:142939506-142940870 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from APF )
Interactions
1700034O15Rik interacts with 56 markers (Mir25, Mir30a, Mir30d, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component extracellular region
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(24)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(24) cDNA(24)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000051431 (Evidence)
Ensembl Gene Model ENSMUSG00000029867 (Evidence)
Entrez Gene 76606 (Evidence)
UniGene 272520
DFCI TC1586317
DoTS DT.55155179
NIA Mouse Gene Index U006739
Consensus CDS Project CCDS20054.1
International Mouse Phenotyping Consortium Status 1700034O15Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000051431 VEGA Gene Model | MGI Sequence Detail 1287 C57BL/6J ±  kb
transcript OTTMUST00000129990 VEGA | MGI Sequence Detail 741 Not Applicable 
polypeptide OTTMUSP00000069745 VEGA | MGI Sequence Detail 108 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(4) UniProt(1)
Polymorphisms
SNPs within 2kb(11 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory