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Rbmxl2 Gene Detail
Summary
  • Symbol
    Rbmxl2
  • Name
    RNA binding motif protein, X-linked-like 2
  • Synonyms
    1700012H05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923822
    NCBI Gene: 76572
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:107209445-107210916 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 56.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923822
protein coding gene Chr7:107209445-107210916 (.)
129S1/SvImJ MGP_129S1SvImJ_G0032794
protein coding gene Chr7:110551516-110555768 (+)
A/J MGP_AJ_G0032775
protein coding gene Chr7:107803737-107805212 (+)
AKR/J MGP_AKRJ_G0032707
protein coding gene Chr7:110512529-110514004 (+)
BALB/cJ MGP_BALBcJ_G0032781
protein coding gene Chr7:107507598-107509073 (+)
C3H/HeJ MGP_C3HHeJ_G0032490
protein coding gene Chr7:110525885-110527360 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033286
protein coding gene Chr7:115113437-115114908 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030264
protein coding gene Chr7:109480832-109482308 (+)
CAST/EiJ MGP_CASTEiJ_G0031821
protein coding gene Chr7:102127872-102129343 (+)
CBA/J MGP_CBAJ_G0032465
protein coding gene Chr7:118906005-118907480 (+)
DBA/2J MGP_DBA2J_G0032616
protein coding gene Chr7:105936989-105938500 (+)
FVB/NJ MGP_FVBNJ_G0032568
protein coding gene Chr7:105776629-105778100 (+)
LP/J MGP_LPJ_G0032708
protein coding gene Chr7:112140702-112142177 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032602
protein coding gene Chr7:120543740-120545265 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033305
protein coding gene Chr7:109569798-109571273 (+)
PWK/PhJ MGP_PWKPhJ_G0031527
protein coding gene Chr7:98815239-98816730 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031377
protein coding gene Chr7:96175202-96176677 (+)
WSB/EiJ MGP_WSBEiJ_G0031936
protein coding gene Chr7:110309765-110311240 (+)



Homology
more
  • Human Ortholog
    RBMXL2, RBMX like 2
  • Vertebrate Orthologs
    3
  • Human Ortholog
    RBMXL2, RBMX like 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    HNRNPGT, HNRNPG-T, HNRPGT
  • Links
    NCBI Gene ID: 27288
    neXtProt AC: NX_O75526
    UniProt: O75526

  • Chr Location
    11p15.4; chr11:7088934-7091148 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Rbmxl2
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 76572 NCBI Gene Model | MGI Sequence Detail 1472 C57BL/6J ±  kb
transcript NM_029660 RefSeq | MGI Sequence Detail 1472 C57BL/6  
polypeptide NP_083936 RefSeq | MGI Sequence Detail 385 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR012604 RBM1CTR
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory