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Atg2b Gene Detail
Summary
  • Symbol
    Atg2b
  • Name
    autophagy related 2B
  • Synonyms
    2410024A21Rik, C030004M05Rik, C630028L02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923809
    NCBI Gene: 76559
Location & Maps
more
  • Sequence Map
    Chr12:105613539-105685241 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      71703 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 55.82 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATG2B, autophagy related 2B
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ATG2B, autophagy related 2B
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C14orf103
  • Links
    NCBI Gene ID: 55102
    neXtProt AC: NX_Q96BY7

  • Chr Location
    14q32.2; chr14:96281258-96363341 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    5
  • Genomic Mutations
    1 involving Atg2b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041341 Ensembl Gene Model | MGI Sequence Detail 71703 C57BL/6J ±  kb
transcript ENSMUST00000041055 Ensembl | MGI Sequence Detail 10173 Not Applicable  
polypeptide ENSMUSP00000037441 Ensembl | MGI Sequence Detail 2075 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    435 from dbSNP Build 142
Protein
Information
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  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000004412 autophagy-related protein 2 homolog B
  • InterPro Domains
    IPR015412 Autophagy-related, C-terminal
    IPR026849 Autophagy-related protein 2
    IPR026885 Autophagy-related protein 2 CAD motif
    IPR026854 Vacuolar protein sorting-associated protein 13, N-terminal domain
Molecular
Reagents
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  • All nucleic 14
    Genomic 1
    cDNA 13

    Microarray probesets 6
Other
Accession IDs
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MGI:1926114, MGI:2144758, MGI:2144850, MGI:2145049, MGI:2441919
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:186989 Nicola AM, et al., Macrophage Autophagy in Immunity to Cryptococcus neoformans and Candida albicans. Infect Immun. 2012 Sep;80(9):3065-76

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory