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Atg2b Gene Detail
Summary
  • Symbol
    Atg2b
  • Name
    autophagy related 2B
  • Synonyms
    2410024A21Rik, C030004M05Rik, C630028L02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923809
    NCBI Gene: 76559
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:105616136-105685211 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 55.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    424 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923809
protein coding gene Chr12:105613539-105685241 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020093
protein coding gene Chr12:107494626-107565556 (-)
A/J MGP_AJ_G0020047
protein coding gene Chr12:103479416-103551735 (-)
AKR/J MGP_AKRJ_G0020023
protein coding gene Chr12:106482663-106555433 (-)
BALB/cJ MGP_BALBcJ_G0020033
protein coding gene Chr12:103897434-103968640 (-)
C3H/HeJ MGP_C3HHeJ_G0019835
protein coding gene Chr12:106912032-106982631 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020478
protein coding gene Chr12:110806402-110879410 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018090
protein coding gene Chr12:100089622-100156353 (-)
CAST/EiJ MGP_CASTEiJ_G0019377
protein coding gene Chr12:101715565-101788917 (-)
CBA/J MGP_CBAJ_G0019802
protein coding gene Chr12:115196152-115270635 (-)
DBA/2J MGP_DBA2J_G0019919
protein coding gene Chr12:103005506-103076006 (-)
FVB/NJ MGP_FVBNJ_G0019904
protein coding gene Chr12:101794654-101862303 (-)
LP/J MGP_LPJ_G0019994
protein coding gene Chr12:107392726-107463651 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019942
protein coding gene Chr12:118599974-118678393 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020507
protein coding gene Chr12:105864593-105943635 (-)
PWK/PhJ MGP_PWKPhJ_G0019136
protein coding gene Chr12:97598680-97666434 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018940
protein coding gene Chr12:100099401-100166946 (-)
WSB/EiJ MGP_WSBEiJ_G0019434
protein coding gene Chr12:106828556-106898353 (-)



Homology
more
  • Human Ortholog
    ATG2B, autophagy related 2B
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ATG2B, autophagy related 2B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf103
  • Links
    NCBI Gene ID: 55102
    neXtProt AC: NX_Q96BY7
    UniProt: Q96BY7

  • Chr Location
    14q32.2; chr14:96281258-96363341 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041341 Ensembl Gene Model | MGI Sequence Detail 69076 C57BL/6J ±  kb
transcript ENSMUST00000041055 Ensembl | MGI Sequence Detail 7546 Not Applicable  
polypeptide ENSMUSP00000037441 Ensembl | MGI Sequence Detail 2075 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 18
    Genomic 2
    cDNA 16

    Microarray probesets 6
Other
Accession IDs
less
MGI:1926114, MGI:2144758, MGI:2144850, MGI:2145049, MGI:2441919
References
more
  • Summaries
    All 32
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:34253 Gaubatz JW, et al., Mouse satellite DNA is transcribed in senescent cardiac muscle. J Biol Chem. 1990 Oct 15;265(29):17753-8
  • Latest
    J:186989 Nicola AM, et al., Macrophage Autophagy in Immunity to Cryptococcus neoformans and Candida albicans. Infect Immun. 2012 Sep;80(9):3065-76

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory