Ccdc6
Gene Detail

Symbol Name ID

Ccdc6 coiled-coil domain containing 6 MGI:1923801

Synonyms

2810012H18Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 10

36.68 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr10:70097121-70193200 bp, + strand From VEGA annotation of GRCm38   96080 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:34786  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ccdc6

Human homologs

Human Homolog		CCDC6, coiled-coil domain containing 6
NCBI Gene ID		8030
neXtProt AC		NX_Q16204
Human Synonyms		D10S170, H4, PTC, TPC, TST1
Human Chr (Location)		10q21; chr10:61548505-61666414 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human CCDC6

Alleles and phenotypes

All alleles(12) : Gene trapped(12)

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	biological_process
Component	cytoplasm, cytoskeleton
Function	SH3 domain binding

External Resources: FuncBase

Expression

cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(4) cDNA(4)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000032767 (Evidence)
Ensembl Gene Model	ENSMUSG00000048701 (Evidence)
Entrez Gene	76551 (Evidence)
DFCI	TC1605432, TC1614810
DoTS	DT.87072737
NIA Mouse Gene Index	U063340
Consensus CDS Project	CCDS48591.1
International Mouse Knockout Project Status	Ccdc6

Sequences

Length	Strain/Species
genomic	OTTMUSG00000032767	VEGA Gene Model | MGI Sequence Detail	96080	C57BL/6J
transcript	OTTMUST00000081576	VEGA | MGI Sequence Detail	5511	Not Applicable
polypeptide	OTTMUSP00000043662	VEGA | MGI Sequence Detail	469	Not Applicable

All sequences(32) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(567 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR019152	Protein of unknown function DUF2046
Protein Ontology	PR:000029346	coiled-coil domain-containing protein 6

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
All references(27)

Other accession IDs

MGI:2143483, MGI:2143514, MGI:2143802