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Cenpo
Gene Detail
Symbol

Name
ID
Cenpo
centromere protein O
MGI:1923800
Synonyms
2810429O05Rik, 8430427C03Rik, D12Ertd482e
Feature Type
protein coding gene
Genetic Map
Chromosome 12
2.02 cM, cytoband A1.1
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr12:4196004-4234294 bp, - strand
From VEGA annotation of GRCm38

  38291 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49760  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CENPO
Gene Tree: Cenpo

Human
homologs
CENPO, centromere protein O
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 79172
neXtProt AC: NX_Q9BU64

Human Synonyms: CENP-O, ICEN-36, MCM21R

Human Chr (Location): 2p23.3; chr2:24793306-24822376 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(15) : Gene trapped(12) Targeted(3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Cenpo interacts with 330 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process centromere complex assembly
Component chromosome, chromosome, centromeric region, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (213)    Tissues (49)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 213
cDNA source data(13)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cenpo    NEW 
Molecular
reagents
All nucleic(14) cDNA(13) Primer pair(1)
Microarray probesets(8)
Other database
links
VEGA Gene Model OTTMUSG00000033102 (Evidence)
Ensembl Gene Model ENSMUSG00000020652 (Evidence)
Entrez Gene 52504 (Evidence)
Consensus CDS Project CCDS25788.1
International Mouse Phenotyping Consortium Status Cenpo
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033102 VEGA Gene Model | MGI Sequence Detail 38291 C57BL/6J ±  kb
transcript OTTMUST00000082722 VEGA | MGI Sequence Detail 4348 Not Applicable 
polypeptide OTTMUSP00000044373 VEGA | MGI Sequence Detail 298 Not Applicable 

For the selected sequences
All sequences(63) RefSeq(14) UniProt(5)
Polymorphisms
SNPs within 2kb(260 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018464 Centromere protein O
Protein Ontology PR:000005335 centromere protein O
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(36)
Other
accession IDs
MGI:1196418, MGI:1918755, MGI:2144825

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory