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Gatc Gene Detail
Summary
  • Symbol
    Gatc
  • Name
    glutamyl-tRNA(Gln) amidotransferase, subunit C
  • Synonyms
    2010003O18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923776
    NCBI Gene: 384281
Location & Maps
more
  • Sequence Map
    Chr5:115333239-115341178 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      7940 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 56.05 cM, cytoband F
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    GATC, glutamyl-tRNA amidotransferase subunit C
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GATC, glutamyl-tRNA amidotransferase subunit C
    Orthology source: HomoloGene, HGNC
  • Synonyms
    15E1.2
  • Links
    NCBI Gene ID: 283459
    neXtProt AC: NX_O43716

  • Chr Location
    12q24.31; chr12:120446438-120463753 (+)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving Gatc
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    12
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    38
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014655 VEGA Gene Model | MGI Sequence Detail 7940 C57BL/6J ±  kb
transcript OTTMUST00000034760 VEGA | MGI Sequence Detail 1797 Not Applicable  
polypeptide OTTMUSP00000015556 VEGA | MGI Sequence Detail 155 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    64 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000007864 GatC-like protein
  • EC
    6.3.5.-
  • InterPro Domains
    IPR003837 Glu-tRNAGln amidotransferase C subunit
Molecular
Reagents
less
  • All nucleic 39
    Genomic 1
    cDNA 38

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:212283 Echevarria L, et al., Glutamyl-tRNAGln amidotransferase is essential for mammalian mitochondrial translation in vivo. Biochem J. 2014 May 15;460(1):91-101
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/13/2016
MGI 6.05 		The Jackson Laboratory