Gatc
Gene Detail

Symbol

Name
ID

Gatc
glutamyl-tRNA(Gln) amidotransferase, subunit C
MGI:1923776

Synonyms

2010003O18Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 5
56.05 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr5:115333242-115341178 bp, - strand From VEGA annotation of GRCm38   7937 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:19922  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Gatc

Human
homologs

Human Homolog		GATC, glutamyl-tRNA(Gln) amidotransferase, subunit C
NCBI Gene ID		283459
neXtProt AC		NX_O43716
Human Synonyms		15E1.2
Human Chr (Location)		12q24.31; chr12:120446438-120463753 (+)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Gatc interacts with 196 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (12 annotations)

Process	glutaminyl-tRNAGln biosynthesis via transamidation, mitochondrial translation, ...
Component	glutamyl-tRNA(Gln) amidotransferase complex, mitochondrion
Function	ATP binding, cobyrinate a,c-diamide synthase activity, ...

External Resources: FuncBase

Expression

cDNA source data(38)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(39) Genomic(1) cDNA(38)
Microarray probesets(3)

Other database
links

VEGA Gene Model	OTTMUSG00000014655 (Evidence)
Ensembl Gene Model	ENSMUSG00000029536 (Evidence)
Entrez Gene	384281 (Evidence)
UniGene	229308
DFCI	TC1594217, TC1612197, TC1581952
DoTS	DT.94375599, DT.40154961
NIA Mouse Gene Index	U026628
EC	6.3.5.-
Consensus CDS Project	CCDS19588.1
International Mouse Knockout Project Status	Gatc

Sequences

Length	Strain/Species
genomic	OTTMUSG00000014655	VEGA Gene Model | MGI Sequence Detail	7937	C57BL/6J
transcript	OTTMUST00000034760	VEGA | MGI Sequence Detail	1794	Not Applicable
polypeptide	OTTMUSP00000015556	VEGA | MGI Sequence Detail	155	Not Applicable

All sequences(21) RefSeq(2) UniProt(1)

Polymorphisms

SNPs within 2kb(64 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR003837	Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
Protein Ontology	PR:000007864	GatC-like protein

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)