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Gatc
Gene Detail
Symbol

Name
ID
Gatc
glutamyl-tRNA(Gln) amidotransferase, subunit C
MGI:1923776
Synonyms
2010003O18Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
56.05 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:115333242-115341178 bp, - strand
From VEGA annotation of GRCm38

  7937 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:19922  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Gatc

Human
homologs
Human Homolog GATC, glutamyl-tRNA(Gln) amidotransferase, subunit C
NCBI Gene ID 283459
neXtProt AC  NX_O43716
Human Synonyms  15E1.2
Human Chr (Location)  12q24.31; chr12:120446438-120463753 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Gatc interacts with 196 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(38)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(39) Genomic(1) cDNA(38)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000014655 (Evidence)
Ensembl Gene ModelENSMUSG00000029536 (Evidence)
Entrez Gene384281 (Evidence)
UniGene229308
DFCITC1612197, TC1594217, TC1581952
DoTSDT.40154961, DT.94375599
NIA Mouse Gene IndexU026628
EC6.3.5.-
Consensus CDS ProjectCCDS19588.1
International Mouse Knockout Project StatusGatc
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014655 VEGA Gene Model | MGI Sequence Detail 7937 C57BL/6J ±  kb
transcript OTTMUST00000034760 VEGA | MGI Sequence Detail 1794 Not Applicable 
polypeptide OTTMUSP00000015556 VEGA | MGI Sequence Detail 155 Not Applicable 

For the selected sequences
All sequences(21) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(64 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
Protein Ontology PR:000007864 GatC-like protein
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory