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Fam209 Gene Detail
Summary
  • Symbol
    Fam209
  • Name
    family with sequence similarity 209
  • Synonyms
    1700029J11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923676
    NCBI Gene: 76426
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:172472554-172474316 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 94.87 cM, cytoband H3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923676
protein coding gene Chr2:172472520-172474331 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026947
protein coding gene Chr2:178645066-178646877 (+)
A/J MGP_AJ_G0026914
protein coding gene Chr2:171168307-171170118 (+)
AKR/J MGP_AKRJ_G0026885
protein coding gene Chr2:176337608-176339419 (+)
BALB/cJ MGP_BALBcJ_G0026923
protein coding gene Chr2:171565682-171567493 (+)
C3H/HeJ MGP_C3HHeJ_G0026665
protein coding gene Chr2:176688156-176689967 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027370
protein coding gene Chr2:183814789-183816600 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024740
protein coding gene Chr2:164417005-164418797 (+)
CAST/EiJ MGP_CASTEiJ_G0026123
protein coding gene Chr2:177360152-177361920 (+)
CBA/J MGP_CBAJ_G0026642
protein coding gene Chr2:190671030-190672841 (+)
DBA/2J MGP_DBA2J_G0026780
protein coding gene Chr2:170262262-170264073 (+)
FVB/NJ MGP_FVBNJ_G0026746
protein coding gene Chr2:168865478-168867289 (+)
LP/J MGP_LPJ_G0026881
protein coding gene Chr2:178579991-178581802 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026765
protein coding gene Chr2:193664683-193666494 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027427
protein coding gene Chr2:176306330-176308141 (+)
PWK/PhJ MGP_PWKPhJ_G0025860
protein coding gene Chr2:170029709-170031477 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025660
protein coding gene Chr2:175303330-175305116 (+)
WSB/EiJ MGP_WSBEiJ_G0026196
protein coding gene Chr2:177279270-177281081 (+)



Homology
more
  • Human Ortholog
    FAM209A, family with sequence similarity 209 member A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    FAM209A, family with sequence similarity 209 member A
    Orthology source: HGNC
  • Synonyms
    C20orf106, dJ1153D9.3
  • Links
    NCBI Gene ID: 200232
    neXtProt AC: NX_Q5JX71
    UniProt: Q5JX71

  • Chr Location
    20q13.31; chr20:56524729-56533590 (+)  GRCh38.p7

  • Human Ortholog
    FAM209B, family with sequence similarity 209 member B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf107, dJ1153D9.4
  • Links
    NCBI Gene ID: 388799
    neXtProt AC: NX_Q5JX69
    UniProt: Q5JX69

  • Chr Location
    20q13.31; chr20:56527124-56555626 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76426 NCBI Gene Model | MGI Sequence Detail 1763 C57BL/6J ±  kb
transcript NM_029608 RefSeq | MGI Sequence Detail 649 Not Specified  
polypeptide NP_083884 RefSeq | MGI Sequence Detail 170 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027943 FAM209 family
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory