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1700001O22Rik Gene Detail
Summary
  • Symbol
    1700001O22Rik
  • Name
    RIKEN cDNA 1700001O22 gene
  • Synonyms
    1700113K14Rik, 4930549G18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923631
    NCBI Gene: 73598
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:30795563-30803723 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 21.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923631
protein coding gene Chr2:30794769-30803723 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025572
protein coding gene Chr2:29072438-29081329 (-)
A/J MGP_AJ_G0025550
protein coding gene Chr2:27893636-27902522 (-)
AKR/J MGP_AKRJ_G0025519
protein coding gene Chr2:28843426-28852313 (-)
BALB/cJ MGP_BALBcJ_G0025546
protein coding gene Chr2:28030814-28039705 (-)
C3H/HeJ MGP_C3HHeJ_G0025307
protein coding gene Chr2:28769706-28778597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025991
protein coding gene Chr2:30022668-30033842 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023399
protein coding gene Chr2:26661313-26670500 (-)
CAST/EiJ MGP_CASTEiJ_G0024769
protein coding gene Chr2:28690937-28699825 (-)
CBA/J MGP_CBAJ_G0025284
protein coding gene Chr2:31066348-31075235 (-)
DBA/2J MGP_DBA2J_G0025417
protein coding gene Chr2:27676617-27685507 (-)
FVB/NJ MGP_FVBNJ_G0025380
protein coding gene Chr2:27508528-27517417 (-)
LP/J MGP_LPJ_G0025503
protein coding gene Chr2:28981958-28990842 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025410
protein coding gene Chr2:30870006-30878892 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026049
protein coding gene Chr2:28755506-28764397 (-)
PWK/PhJ MGP_PWKPhJ_G0024516
protein coding gene Chr2:27538502-27547483 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024316
protein coding gene Chr2:28887963-28896905 (-)
WSB/EiJ MGP_WSBEiJ_G0024837
protein coding gene Chr2:28918766-28927657 (-)



Homology
more
  • Human Ortholog
    C9orf50, chromosome 9 open reading frame 50
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C9orf50, chromosome 9 open reading frame 50
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 375759
    neXtProt AC: NX_Q5SZB4
    UniProt: Q5SZB4

  • Chr Location
    9q34.11; chr9:129612225-129622275 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73598 NCBI Gene Model | MGI Sequence Detail 8161 C57BL/6J ±  kb
transcript NM_198000 RefSeq | MGI Sequence Detail 1440 C57BL/6  
polypeptide NP_932117 RefSeq | MGI Sequence Detail 375 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR032756 Domain of unknown function DUF4685
Molecular
Reagents
less
  • All nucleic 41
    cDNA 41

    Microarray probesets 4
Other
Accession IDs
less
MGI:1920848, MGI:1925455
References
more
  • Summaries
    All 22
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:237827 Gineste C, et al., In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. Neuromuscul Disord. 2013 Apr;23(4):357-69

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory