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Txndc11 Gene Detail
Summary
  • Symbol
    Txndc11
  • Name
    thioredoxin domain containing 11
  • Synonyms
    2810408E11Rik, EF-hand binding protein 1, EFP1, Txdc11
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923620
    NCBI Gene: 106200
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:11074911-11134650 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 6.33 cM, cytoband B1
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    295 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923620
protein coding gene Chr16:11074911-11134679 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022520
protein coding gene Chr16:7923237-7986006 (-)
A/J MGP_AJ_G0022482
protein coding gene Chr16:7487162-7548050 (-)
AKR/J MGP_AKRJ_G0022458
protein coding gene Chr16:7826453-7898144 (-)
BALB/cJ MGP_BALBcJ_G0022486
protein coding gene Chr16:7621264-7688122 (-)
C3H/HeJ MGP_C3HHeJ_G0022253
protein coding gene Chr16:7910864-7973545 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022935
protein coding gene Chr16:8084373-8152254 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020455
protein coding gene Chr16:7646461-7706140 (-)
CAST/EiJ MGP_CASTEiJ_G0021780
protein coding gene Chr16:7934062-7997095 (-)
CBA/J MGP_CBAJ_G0022222
protein coding gene Chr16:8441383-8501960 (-)
DBA/2J MGP_DBA2J_G0022353
protein coding gene Chr16:7494424-7554551 (-)
FVB/NJ MGP_FVBNJ_G0022329
protein coding gene Chr16:7485800-7546896 (-)
LP/J MGP_LPJ_G0022421
protein coding gene Chr16:7876181-7942565 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022351
protein coding gene Chr16:8128878-8194489 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022948
protein coding gene Chr16:7775891-7845208 (-)
PWK/PhJ MGP_PWKPhJ_G0021520
protein coding gene Chr16:7709519-7772692 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021350
protein coding gene Chr16:7844157-7905106 (-)
WSB/EiJ MGP_WSBEiJ_G0021828
protein coding gene Chr16:7869541-7931859 (-)



Homology
more
  • Human Ortholog
    TXNDC11, thioredoxin domain containing 11
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TXNDC11, thioredoxin domain containing 11
    Orthology source: HomoloGene, HGNC
  • Synonyms
    EFP1
  • Links
    NCBI Gene ID: 51061
    neXtProt AC: NX_Q6PKC3
    UniProt: Q6PKC3

  • Chr Location
    16p13.13; chr16:11679080-11742878 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022498 Ensembl Gene Model | MGI Sequence Detail 59740 C57BL/6J ±  kb
transcript ENSMUST00000038424 Ensembl | MGI Sequence Detail 3095 Not Applicable  
polypeptide ENSMUSP00000041113 Ensembl | MGI Sequence Detail 948 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 59
    cDNA 59

    Microarray probesets 6
Other
Accession IDs
less
MGI:2146427
References
more
  • Summaries
    All 30
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:116038 Moritani M, et al., Identification of diabetes susceptibility loci in db mice by combined quantitative trait loci analysis and haplotype mapping. Genomics. 2006 Dec;88(6):719-30

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory