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Atp11b Gene Detail
Summary
  • Symbol
    Atp11b
  • Name
    ATPase, class VI, type 11B
  • Synonyms
    1110019I14Rik, mKIAA0956
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923545
    NCBI Gene: 76295
  • Gene Overview
    MyGene.info: ATP11B
Location & Maps
more
  • Sequence Map
    Chr3:35754106-35856276 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      102171 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 17.36 cM, cytoband B
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATP11B, ATPase phospholipid transporting 11B (putative)
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP11B, ATPase phospholipid transporting 11B (putative)
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATPIF, ATPIR
  • Links
    NCBI Gene ID: 23200
    neXtProt AC: NX_Q9Y2G3

  • Chr Location
    3q26.33; chr3:182793503-182921635 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 32919
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ATP11B
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    27
  • Gene trapped
    24
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Atp11b
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022012 VEGA Gene Model | MGI Sequence Detail 102171 C57BL/6J ±  kb
transcript OTTMUST00000052260 VEGA | MGI Sequence Detail 4868 Not Applicable  
polypeptide OTTMUSP00000024745 VEGA | MGI Sequence Detail 1175 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    474 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 137
    cDNA 136
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory