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0610040J01Rik
Gene Detail
Symbol

Name
ID
0610040J01Rik
RIKEN cDNA 0610040J01 gene
MGI:1923511
Feature Type
protein coding gene
Genetic Map
Chromosome 5
32.80 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:63812363-63899625 bp, + strand
From VEGA annotation of GRCm38

  87263 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:49537  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

HCOP human homology predictions: C4orf19
Gene Tree: 0610040J01Rik

Human
homologs
C4orf19, chromosome 4 open reading frame 19
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55286
neXtProt AC: NX_Q8IY42

Human Chr (Location): 4p14; chr4:37453454-37593510 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Gene trapped(1) Radiation induced(1)
Genomic Mutations involving 0610040J01Rik (1)
Incidental mutations (data from Mutagenetix , APF )
Phenotype Images(4)
Interactions
0610040J01Rik interacts with 118 markers (Mir7-2, Mir7b, Mir10a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (111)    Tissues (34)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 111
cDNA source data(52)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(52) cDNA(52)
Microarray probesets(2)
Other database
links
VEGA Gene Model OTTMUSG00000055109 (Evidence)
Ensembl Gene Model ENSMUSG00000060512 (Evidence)
Entrez Gene 76261 (Evidence)
UniGene 38143
DFCI TC1579150
DoTS DT.484067
Consensus CDS Project CCDS39092.1
International Mouse Phenotyping Consortium Status 0610040J01Rik
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000055109 VEGA Gene Model | MGI Sequence Detail 87263 C57BL/6J ±  kb
transcript OTTMUST00000136471 VEGA | MGI Sequence Detail 2008 Not Applicable 
polypeptide OTTMUSP00000072021 VEGA | MGI Sequence Detail 313 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(6) UniProt(4)
Polymorphisms
SNPs within 2kb(383 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:196080 Elsen GE, et al., The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map. Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4081-6
All references(24)
Other
accession IDs
MGI:2140955

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory