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0610040J01Rik Gene Detail
Summary
  • Symbol
    0610040J01Rik
  • Name
    RIKEN cDNA 0610040J01 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923511
    NCBI Gene: 76261
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:63812363-63899625 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 32.80 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    381 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923511
protein coding gene Chr5:63811989-63899626 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029563
protein coding gene Chr5:63384044-63466460 (+)
A/J MGP_AJ_G0029531
protein coding gene Chr5:61019779-61101661 (+)
AKR/J MGP_AKRJ_G0029479
protein coding gene Chr5:62919237-63003501 (+)
BALB/cJ MGP_BALBcJ_G0029540
protein coding gene Chr5:61698058-61782415 (+)
C3H/HeJ MGP_C3HHeJ_G0029263
protein coding gene Chr5:63293263-63377401 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029994
protein coding gene Chr5:66006726-66101624 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027234
protein coding gene Chr5:57133971-57213727 (+)
CAST/EiJ MGP_CASTEiJ_G0028671
protein coding gene Chr5:62359191-62442798 (+)
CBA/J MGP_CBAJ_G0029232
protein coding gene Chr5:68105646-68200269 (+)
DBA/2J MGP_DBA2J_G0029378
protein coding gene Chr5:61046385-61128570 (+)
FVB/NJ MGP_FVBNJ_G0029338
protein coding gene Chr5:60234344-60314890 (+)
LP/J MGP_LPJ_G0029463
protein coding gene Chr5:63837669-63925462 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029366
protein coding gene Chr5:71067970-71150950 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030027
protein coding gene Chr5:62625938-62714542 (+)
PWK/PhJ MGP_PWKPhJ_G0028395
protein coding gene Chr5:60030070-60111930 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028229
protein coding gene Chr5:61969524-62061307 (+)
WSB/EiJ MGP_WSBEiJ_G0028752
protein coding gene Chr5:62828398-62913121 (+)



Homology
more
  • Human Ortholog
    C4orf19, chromosome 4 open reading frame 19
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C4orf19, chromosome 4 open reading frame 19
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 55286
    neXtProt AC: NX_Q8IY42
    UniProt: Q8IY42

  • Chr Location
    4p14; chr4:37453454-37596146 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    19 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060512 Ensembl Gene Model | MGI Sequence Detail 87263 C57BL/6J ±  kb
transcript ENSMUST00000081747 Ensembl | MGI Sequence Detail 2008 Not Applicable  
polypeptide ENSMUSP00000080443 Ensembl | MGI Sequence Detail 313 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR031528 Protein of unknown function DUF4699
Molecular
Reagents
less
  • All nucleic 53
    cDNA 53

    Microarray probesets 2
Other
Accession IDs
less
MGI:2140955
References
more
  • Summaries
    All 40
    Developmental Gene Expression 3
    Gene Ontology 1
    Phenotypes 19
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:196080 Elsen GE, et al., The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map. Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4081-6

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory