About   Help   FAQ
Slc38a3
Gene Detail
Symbol

Name
ID
Slc38a3
solute carrier family 38, member 3
MGI:1923507
Synonyms
0610012J02Rik, D9Ucla2, Snat3
Feature Type
protein coding gene
Genetic Map
Chromosome 9
58.69 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(7)
Sequence Map
Chr9:107651154-107668968 bp, - strand
From NCBI annotation of GRCm38

  17815 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4983  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc38a3

Human
homologs
Human Homolog SLC38A3, solute carrier family 38, member 3
NCBI Gene ID 10991
neXtProt AC  NX_Q99624
Human Synonyms  G17, NAT1, SN1
Human Chr (Location)  3p21.3; chr3:50205259-50220979 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc38a3 interacts with 185 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (103)    Tissues (34)    Images (48)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 103
cDNA source data(145)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(149) cDNA(147) Primer pair(1) Other(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000010064 (Evidence)
Entrez Gene76257 (Evidence)
UniGene296560
DFCITC1575967, TC1590962
DoTSDT.94148570, DT.91346114, DT.491840, DT.101158056
NIA Mouse Gene IndexU031320
Consensus CDS ProjectCCDS23503.1
International Mouse Knockout Project StatusSlc38a3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 76257 NCBI Gene Model | MGI Sequence Detail 17815 C57BL/6J ±  kb
transcript NM_023805 RefSeq | MGI Sequence Detail 2622 Not Specified 
polypeptide Q9DCP2 UniProt | EBI | MGI Sequence Detail 505 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(8) UniProt(1)
Polymorphisms
RFLP(1) : SNPs within 2kb(154 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013057 Amino acid transporter, transmembrane
Protein Ontology PR:000015120 sodium-coupled neutral amino acid transporter 3
Graphical View of Protein Domain Structure
References
(Earliest) J:15567 Warden CH, et al., Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse. Genomics. 1993 Nov;18(2):295-307
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)
Other
accession IDs
MGD-MRK-8787, MGI:94853

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/11/2014
MGI 5.20
The Jackson Laboratory