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6530402F18Rik Gene Detail
Summary
  • Symbol
    6530402F18Rik
  • Name
    RIKEN cDNA 6530402F18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923470
    NCBI Gene: 76220
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:29245116-29252993 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 19.66 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923470
lncRNA gene Chr2:29245107-29253006 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015407
unclassified non-coding RNA gene Chr2:27369309-27377204 (-)
A/J MGP_AJ_G0015382
unclassified non-coding RNA gene Chr2:26322166-26330065 (-)
AKR/J MGP_AKRJ_G0015346
unclassified non-coding RNA gene Chr2:27195040-27202939 (-)
BALB/cJ MGP_BALBcJ_G0015346
unclassified non-coding RNA gene Chr2:26445515-26453415 (-)
C3H/HeJ MGP_C3HHeJ_G0015170
unclassified non-coding RNA gene Chr2:27117564-27125463 (-)
C57BL/6NJ MGP_C57BL6NJ_G0015800
unclassified non-coding RNA gene Chr2:28268874-28276773 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013541
unclassified non-coding RNA gene Chr2:25120767-25128673 (-)
CAST/EiJ MGP_CASTEiJ_G0014721
unclassified non-coding RNA gene Chr2:27017173-27025060 (-)
CBA/J MGP_CBAJ_G0015149
unclassified non-coding RNA gene Chr2:29240054-29247953 (-)
DBA/2J MGP_DBA2J_G0015244
unclassified non-coding RNA gene Chr2:26110882-26118781 (-)
FVB/NJ MGP_FVBNJ_G0015251
unclassified non-coding RNA gene Chr2:25915727-25923625 (-)
LP/J MGP_LPJ_G0015324
unclassified non-coding RNA gene Chr2:27311574-27319468 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015277
unclassified non-coding RNA gene Chr2:29212128-29220027 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0015839
unclassified non-coding RNA gene Chr2:27107058-27114957 (-)
PWK/PhJ MGP_PWKPhJ_G0014510
unclassified non-coding RNA gene Chr2:25928649-25936535 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014298
unclassified non-coding RNA gene Chr2:27210402-27218309 (-)
WSB/EiJ MGP_WSBEiJ_G0014828
unclassified non-coding RNA gene Chr2:27242139-27250034 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 76220 NCBI Gene Model | MGI Sequence Detail 7878 C57BL/6J ±  kb
transcript NR_029460 RefSeq | MGI Sequence Detail 4308 C57BL/6  
polypeptide Q9D362 UniProt | EBI | MGI Sequence Detail 153 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 4
References
more
  • Summaries
    All 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory